RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 DLK2Q6UY11 383 aa23.99■■□□□ 1.43
DNMT1-216ENST00000588952 CDAN1Q8IWY9 1227 aa23.99■■□□□ 1.43
DNMT1-216ENST00000588952 LSG1Q9H089 658 aaKnown RBP23.99■■□□□ 1.43
DNMT1-216ENST00000588952 OSBPL5Q9H0X9 879 aaPredicted RBP23.99■■□□□ 1.43
DNMT1-216ENST00000588952 CLEC11AQ9Y240 323 aa23.99■■□□□ 1.43
DNMT1-216ENST00000588952 POLR2AP24928 1970 aaKnown RBP23.99■■□□□ 1.43
DNMT1-216ENST00000588952 BAZ2AQ9UIF9 1905 aaKnown RBP23.98■■□□□ 1.43
DNMT1-216ENST00000588952 ADM5C9JUS6 153 aa23.98■■□□□ 1.43
DNMT1-216ENST00000588952 EVX2Q03828 476 aa23.98■■□□□ 1.43
DNMT1-216ENST00000588952 SH3BP5LQ7L8J4 393 aa23.98■■□□□ 1.43
DNMT1-216ENST00000588952 LDHDQ86WU2 507 aa23.98■■□□□ 1.43
DNMT1-216ENST00000588952 APOBEC3FQ8IUX4 373 aaKnown RBP23.98■■□□□ 1.43
DNMT1-216ENST00000588952 TMEM39BQ9GZU3 492 aa23.98■■□□□ 1.43
DNMT1-216ENST00000588952 SAP30BPQ9UHR5 308 aaKnown RBP23.98■■□□□ 1.43
DNMT1-216ENST00000588952 ENTPD3O75355 529 aa23.97■■□□□ 1.43
DNMT1-216ENST00000588952 NPM3O75607 178 aaKnown RBP23.97■■□□□ 1.43
DNMT1-216ENST00000588952 MFAP1P55081 439 aaKnown RBP23.97■■□□□ 1.43
DNMT1-216ENST00000588952 RASA3Q14644 834 aa23.97■■□□□ 1.43
DNMT1-216ENST00000588952 MAP1SQ66K74 1059 aaPredicted RBP23.97■■□□□ 1.43
DNMT1-216ENST00000588952 IFNL3Q8IZI9 196 aa23.97■■□□□ 1.43
DNMT1-216ENST00000588952 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
DNMT1-216ENST00000588952 ATP8A2Q9NTI2 1148 aa23.97■■□□□ 1.43
DNMT1-216ENST00000588952 RPAP1Q9BWH6 1393 aaPredicted RBP23.96■■□□□ 1.43
DNMT1-216ENST00000588952 SMIM22K7EJ46 135 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 SEC24BO95487 1268 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 APPP05067 770 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 CYP2D6P10635 497 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 SLC4A8Q2Y0W8 1093 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 FAM83AQ86UY5 434 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 FAM151AQ8WW52 585 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 GLIS2Q9BZE0 524 aaPredicted RBP23.96■■□□□ 1.43
DNMT1-216ENST00000588952 DEFB129Q9H1M3 183 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 MYH1P12882 1939 aa23.96■■□□□ 1.43
DNMT1-216ENST00000588952 CYP2D7A0A087X1C5 515 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 DDTLA6NHG4 134 aaPredicted RBP23.95■■□□□ 1.42
DNMT1-216ENST00000588952 PRAMEF18Q5VWM3 479 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 USP48Q86UV5 1035 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 TEPSINQ96N21 525 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 DSCC1Q9BVC3 393 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 ANO2Q9NQ90 1003 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 PALD1Q9ULE6 856 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 SIPA1L1O43166 1804 aa23.95■■□□□ 1.42
DNMT1-216ENST00000588952 COL2A1P02458 1487 aaPredicted RBP23.94■■□□□ 1.42
DNMT1-216ENST00000588952 TNFAIP1Q13829 316 aa23.94■■□□□ 1.42
DNMT1-216ENST00000588952 ALX1Q15699 326 aa23.94■■□□□ 1.42
DNMT1-216ENST00000588952 GIMAP6Q6P9H5 292 aa23.94■■□□□ 1.42
DNMT1-216ENST00000588952 KRT26Q7Z3Y9 468 aa23.94■■□□□ 1.42
DNMT1-216ENST00000588952 MCM9Q9NXL9 1143 aa23.94■■□□□ 1.42
DNMT1-216ENST00000588952 ATRNL1Q5VV63 1379 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 FGAP02671 866 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 SLURP2P0DP57 97 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 TDO2P48775 406 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 TNNI2P48788 182 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 CTR9Q6PD62 1173 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 SULF1Q8IWU6 871 aa23.93■■□□□ 1.42
DNMT1-216ENST00000588952 USP17L12C9JPN9 530 aa23.92■■□□□ 1.42
DNMT1-216ENST00000588952 USP17L21D6R901 530 aa23.92■■□□□ 1.42
DNMT1-216ENST00000588952 MAP4K1Q92918 833 aa23.92■■□□□ 1.42
DNMT1-216ENST00000588952 NAPBQ9H115 298 aa23.92■■□□□ 1.42
DNMT1-216ENST00000588952 LAMB1P07942 1786 aa23.92■■□□□ 1.42
DNMT1-216ENST00000588952 SSC5DA1L4H1 1573 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 ZMYM6O95789 1325 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 TRAF5O00463 557 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 PLCD1P51178 756 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 FMR1Q06787 632 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■■■■■ 28.9
DNMT1-216ENST00000588952 NBPF12Q5TAG4 269 aaPredicted RBP23.91■■□□□ 1.42
DNMT1-216ENST00000588952 CHADLQ6NUI6 762 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 KIAA1211Q6ZU35 1233 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 NACAP1Q9BZK3 213 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 PPP2R3BQ9Y5P8 575 aa23.91■■□□□ 1.42
DNMT1-216ENST00000588952 RBM8AQ9Y5S9 174 aaKnown RBP23.91■■□□□ 1.42
DNMT1-216ENST00000588952 SBK1Q52WX2 424 aa23.9■■□□□ 1.42
DNMT1-216ENST00000588952 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
DNMT1-216ENST00000588952 ZSCAN29Q8IWY8 852 aaPredicted RBP23.9■■□□□ 1.42
DNMT1-216ENST00000588952 POLR3DP05423 398 aaPredicted RBP23.89■■□□□ 1.41
DNMT1-216ENST00000588952 C12orf60Q5U649 245 aa23.89■■□□□ 1.41
DNMT1-216ENST00000588952 CDCA5Q96FF9 252 aa23.89■■□□□ 1.41
DNMT1-216ENST00000588952 DDRGK1Q96HY6 314 aa23.89■■□□□ 1.41
DNMT1-216ENST00000588952 ARPP21Q9UBL0 812 aaPredicted RBP23.89■■□□□ 1.41
DNMT1-216ENST00000588952 LAMA4Q16363 1823 aa23.89■■□□□ 1.41
DNMT1-216ENST00000588952 MINDY4BA8MYZ0 360 aa23.88■■□□□ 1.41
DNMT1-216ENST00000588952 REC8O95072 547 aa23.88■■□□□ 1.41
DNMT1-216ENST00000588952 CSRNP1Q96S65 589 aa23.88■■□□□ 1.41
DNMT1-216ENST00000588952 NBPF3Q9H094 633 aa23.88■■□□□ 1.41
DNMT1-216ENST00000588952 TACC3Q9Y6A5 838 aa23.88■■□□□ 1.41
DNMT1-216ENST00000588952 U3KPZ7 1027 aaPredicted RBP23.88■■□□□ 1.41
DNMT1-216ENST00000588952 ITGBL1O95965 494 aaPredicted RBP23.87■■□□□ 1.41
DNMT1-216ENST00000588952 HAND2P61296 217 aa23.87■■□□□ 1.41
DNMT1-216ENST00000588952 DYNLL2Q96FJ2 89 aa23.87■■□□□ 1.41
DNMT1-216ENST00000588952 USP26Q9BXU7 913 aa23.87■■□□□ 1.41
DNMT1-216ENST00000588952 DHX36Q9H2U1 1008 aaKnown RBP23.87■■□□□ 1.41
DNMT1-216ENST00000588952 TAF6LQ9Y6J9 622 aa23.87■■□□□ 1.41
DNMT1-216ENST00000588952 FAM196BA6NMK8 535 aa23.86■■□□□ 1.41
DNMT1-216ENST00000588952 CTDSPL2Q05D32 466 aa23.86■■□□□ 1.41
DNMT1-216ENST00000588952 PPARAQ07869 468 aa23.86■■□□□ 1.41
DNMT1-216ENST00000588952 BACH2Q9BYV9 841 aa23.86■■□□□ 1.41
DNMT1-216ENST00000588952 DNAJC18Q9H819 358 aa23.86■■□□□ 1.41
DNMT1-216ENST00000588952 HLA-DOAP06340 250 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 GABPAQ06546 454 aa23.85■■□□□ 1.41
DNMT1-216ENST00000588952 NECTIN1Q15223 517 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms