RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 RTEL1Q9NZ71 1219 aa20.41■□□□□ 0.86
ERCC2-211ENST00000588652 RAI14Q9P0K7 980 aa20.41■□□□□ 0.86
ERCC2-211ENST00000588652 CDKL5O76039 1030 aa20.4■□□□□ 0.86
ERCC2-211ENST00000588652 NFXL1Q6ZNB6 911 aa20.4■□□□□ 0.86
ERCC2-211ENST00000588652 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.4■□□□□ 0.86
ERCC2-211ENST00000588652 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
ERCC2-211ENST00000588652 TRIM5Q9C035 493 aa20.4■□□□□ 0.86
ERCC2-211ENST00000588652 LY75O60449 1722 aa20.4■□□□□ 0.86
ERCC2-211ENST00000588652 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.86
ERCC2-211ENST00000588652 CTAGE5O15320 804 aa20.39■□□□□ 0.86
ERCC2-211ENST00000588652 POLR3DP05423 398 aaPredicted RBP20.39■□□□□ 0.86
ERCC2-211ENST00000588652 SNW1Q13573 536 aaKnown RBP20.39■□□□□ 0.86
ERCC2-211ENST00000588652 BRAPQ7Z569 592 aa20.39■□□□□ 0.86
ERCC2-211ENST00000588652 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.86
ERCC2-211ENST00000588652 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.85
ERCC2-211ENST00000588652 NTRK3Q16288 839 aa20.39■□□□□ 0.85
ERCC2-211ENST00000588652 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
ERCC2-211ENST00000588652 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.85
ERCC2-211ENST00000588652 ME1P48163 572 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 IQCB1Q15051 598 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 CCDC73Q6ZRK6 1079 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 C11orf57Q6ZUT1 292 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-211ENST00000588652 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 ENGASEQ8NFI3 743 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 MYL10Q9BUA6 226 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 FAM217BQ9NTX9 383 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-211ENST00000588652 MAGEB6P1A0A0J9YX57 407 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 KIF23Q02241 960 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-211ENST00000588652 MYSM1Q5VVJ2 828 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 ECM29Q5VYK3 1845 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 FBXO33Q7Z6M2 555 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 DRC7Q8IY82 874 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 CCDC24Q8N4L8 307 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 SDR42E1Q8WUS8 393 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 AIFM3Q96NN9 605 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 SBF2Q86WG5 1849 aa20.38■□□□□ 0.85
ERCC2-211ENST00000588652 GOLGA8AA7E2F4 631 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 RRP12Q5JTH9 1297 aaKnown RBP20.37■□□□□ 0.85
ERCC2-211ENST00000588652 LINC00301Q8NCQ3 95 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 PHKBQ93100 1093 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 RIOK1Q9BRS2 568 aaKnown RBP20.37■□□□□ 0.85
ERCC2-211ENST00000588652 ALG1Q9BT22 464 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 NRBP1Q9UHY1 535 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 SLC12A7Q9Y666 1083 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 MYH13Q9UKX3 1938 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 KLRK1P26718 216 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 FAM160A1Q05DH4 1040 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 STX1AQ16623 288 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 POLR3EQ9NVU0 708 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 PCDHA7Q9UN72 937 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
ERCC2-211ENST00000588652 CCDC69A6NI79 296 aa20.36■□□□□ 0.85
ERCC2-211ENST00000588652 PPARAQ07869 468 aa20.36■□□□□ 0.85
ERCC2-211ENST00000588652 RNF41Q9H4P4 317 aaPredicted RBP20.36■□□□□ 0.85
ERCC2-211ENST00000588652 RANBP6O60518 1105 aaKnown RBP20.36■□□□□ 0.85
ERCC2-211ENST00000588652 MTERF4Q7Z6M4 381 aaKnown RBP20.36■□□□□ 0.85
ERCC2-211ENST00000588652 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
ERCC2-211ENST00000588652 ZNF384Q8TF68 577 aa20.36■□□□□ 0.85
ERCC2-211ENST00000588652 SEMA3EO15041 775 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 KINO60870 393 aaKnown RBP20.35■□□□□ 0.85
ERCC2-211ENST00000588652 YEATS4O95619 227 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 CDC25BP30305 580 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
ERCC2-211ENST00000588652 LRMPQ12912 555 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 ADALQ6DHV7 355 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 GJD4Q96KN9 370 aaPredicted RBP20.35■□□□□ 0.85
ERCC2-211ENST00000588652 ZKSCAN3Q9BRR0 538 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 MTA3Q9BTC8 594 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 NID2Q14112 1375 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 TM4SF1P30408 202 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 SART3Q15020 963 aaKnown RBP20.35■□□□□ 0.85
ERCC2-211ENST00000588652 SARM1Q6SZW1 724 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 ANAPC4Q9UJX5 808 aa20.35■□□□□ 0.85
ERCC2-211ENST00000588652 BAZ2AQ9UIF9 1905 aaKnown RBP20.34■□□□□ 0.85
ERCC2-211ENST00000588652 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 STK38Q15208 465 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 KRT40Q6A162 431 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 KCNG4Q8TDN1 519 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 MINDY4BA8MYZ0 360 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 WTAPQ15007 396 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
ERCC2-211ENST00000588652 A0A1W2PQ27 194 aa20.33■□□□□ 0.85
ERCC2-211ENST00000588652 A0A1W2PQ64 194 aa20.33■□□□□ 0.85
ERCC2-211ENST00000588652 A0A1W2PQD8 194 aa20.33■□□□□ 0.85
ERCC2-211ENST00000588652 DYNLL1P63167 89 aaKnown RBP20.33■□□□□ 0.85
ERCC2-211ENST00000588652 MRPS27Q92552 414 aaKnown RBP20.33■□□□□ 0.85
ERCC2-211ENST00000588652 TSC1Q92574 1164 aa20.33■□□□□ 0.85
ERCC2-211ENST00000588652 PDS5AQ29RF7 1337 aaKnown RBP20.33■□□□□ 0.84
ERCC2-211ENST00000588652 STK36Q9NRP7 1315 aa20.33■□□□□ 0.84
ERCC2-211ENST00000588652 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.84
ERCC2-211ENST00000588652 SPTLC2O15270 562 aa20.33■□□□□ 0.84
ERCC2-211ENST00000588652 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.84
ERCC2-211ENST00000588652 RFC4P35249 363 aa20.33■□□□□ 0.84
ERCC2-211ENST00000588652 ERICH2A1L162 156 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms