RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 KRT23Q9C075 422 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
NEDD4L-223ENST00000588516 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.19
NEDD4L-223ENST00000588516 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.19
NEDD4L-223ENST00000588516 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
NEDD4L-223ENST00000588516 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 PPP6R2O75170 966 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 ITPK1Q13572 414 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 KCNF1Q9H3M0 494 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 ITGB4P16144 1822 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
NEDD4L-223ENST00000588516 CCP110O43303 1012 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 FDPSP14324 419 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 KCNA3P22001 575 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 LIFRP42702 1097 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 RCAN1P53805 252 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 KIAA1468Q9P260 1216 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 PCDH10Q9P2E7 1040 aa16.25■□□□□ 0.19
NEDD4L-223ENST00000588516 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 APPP05067 770 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
NEDD4L-223ENST00000588516 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 ZBTB43O43298 467 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 CBFA2T2O43439 604 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 CHGBP05060 677 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 MCAMP43121 646 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 NLRP12P59046 1061 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 HAND2P61296 217 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 SLC39A14Q15043 492 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 CCDC150Q8NCX0 1101 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 NUP98P52948 1817 aa16.23■□□□□ 0.19
NEDD4L-223ENST00000588516 IKBKBO14920 756 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 PDE6AP16499 860 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 RFC4P35249 363 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 TPD52L1Q16890 204 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 CCDC102BQ68D86 513 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 CHST3Q7LGC8 479 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 VGLL2Q8N8G2 317 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 GREM2Q9H772 168 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
NEDD4L-223ENST00000588516 ERICH2A1L162 156 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 CUTAO60888 179 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 DTNBO60941 627 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 GYS1P13807 737 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 KCNJ6P48051 423 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 FOSBP53539 338 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 ANTXR2P58335 489 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 DZIP3Q86Y13 1208 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 LRRC8AQ8IWT6 810 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 PDCL2Q8N4E4 241 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 MPHOSPH8Q99549 860 aa16.21■□□□□ 0.19
NEDD4L-223ENST00000588516 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms