RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-218	ENST00000588344	ARMC9	Q7Z3E5	817 aa		10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	LCORL	Q8N3X6	602 aa		10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	TEPSIN	Q96N21	525 aa		10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	SLC4A4	Q9Y6R1	1079 aa		10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	AKAP11	Q9UKA4	1901 aa		10.87	□□□□□ -0.67
CIRBP-218	ENST00000588344	TMEM88B	A6NKF7	163 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	TBC1D12	O60347	775 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	CELF2	O95319	508 aa	Known RBP	10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	HLA-DOA	P06340	250 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	CHML	P26374	656 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	APLP1	P51693	650 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	MAP3K10	Q02779	954 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	MAPKAPK5	Q8IW41	473 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	CSRNP1	Q96S65	589 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	TMEM39B	Q9GZU3	492 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	ARMT1	Q9H993	441 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	CNTNAP1	P78357	1384 aa		10.86	□□□□□ -0.67
CIRBP-218	ENST00000588344	FLT1	P17948	1338 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	RAD50	Q92878	1312 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	TRAF5	O00463	557 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	APP	P05067	770 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	POLR3D	P05423	398 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	NMI	Q13287	307 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	ALX1	Q15699	326 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	SLFNL1	Q499Z3	407 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	SBK1	Q52WX2	424 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	CST9	Q5W186	159 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	CWC27	Q6UX04	472 aa	Known RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	METTL16	Q86W50	562 aa	Known RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	HHIPL1	Q96JK4	782 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	FAM227B	Q96M60	508 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	DDX4	Q9NQI0	724 aa	Known RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	CREBZF	Q9NS37	354 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	MKRN1	Q9UHC7	482 aa	Known RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	HERC5	Q9UII4	1024 aa	Known RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZNF646	O15015	1829 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	ATRNL1	Q5VV63	1379 aa		10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	COL2A1	P02458	1487 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-218	ENST00000588344	GSG1L2	A8MUP6	293 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344		M0R2C6	588 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	CDC45	O75419	566 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	CHGB	P05060	677 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	IREB2	P48200	963 aa	Known RBP	10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	TTLL12	Q14166	644 aa	Predicted RBP	10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	MAP3K11	Q16584	847 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	PRAMEF18	Q5VWM3	479 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	KIAA1211	Q6ZU35	1233 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZFPM1	Q8IX07	1006 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	SDR42E1	Q8WUS8	393 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	SEC62	Q99442	399 aa	Known RBP	10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	TRIM34	Q9BYJ4	488 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZNF341	Q9BYN7	854 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	EHD4	Q9H223	541 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZNF408	Q9H9D4	720 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	ZNF287	Q9HBT7	754 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	GBA2	Q9HCG7	927 aa	Predicted RBP	10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	MCM9	Q9NXL9	1143 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	CTNNA3	Q9UI47	895 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	SCAF8	Q9UPN6	1271 aa	Known RBP	10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	ADAMTSL1	Q8N6G6	1762 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344	CCDC171	Q6TFL3	1326 aa		10.84	□□□□□ -0.67
CIRBP-218	ENST00000588344		A0A0D9SFI3	127 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	DDTL	A6NHG4	134 aa	Predicted RBP	10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	PRKAB2	O43741	272 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	SLC3A2	P08195	630 aa	Known RBP	10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	HSPD1	P10809	573 aa	Known RBP	10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	HSPA6	P17066	643 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	TDO2	P48775	406 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	NT5C2	P49902	561 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	SH3BP5L	Q7L8J4	393 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	IFNL3	Q8IZI9	196 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	DSCC1	Q9BVC3	393 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	NAPB	Q9H115	298 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	GINM1	Q9NU53	330 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	SWAP70	Q9UH65	585 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	SERPINB13	Q9UIV8	391 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZNF112	Q9UJU3	913 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	PALD1	Q9ULE6	856 aa		10.83	□□□□□ -0.68
CIRBP-218	ENST00000588344	MYH13	Q9UKX3	1938 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	USP17L12	C9JPN9	530 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	USP17L21	D6R901	530 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	SGSM2	O43147	1006 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	CTNND1	O60716	968 aa	Known RBP	10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	USP2	O75604	605 aa	Predicted RBP	10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	MAP3K9	P80192	1104 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	C12orf60	Q5U649	245 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	CTR9	Q6PD62	1173 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	SAPCD2	Q86UD0	394 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	SKAP1	Q86WV1	359 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	ANKRD13A	Q8IZ07	590 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	CCDC102A	Q96A19	550 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	KLRG1	Q96E93	195 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	SAP30BP	Q9UHR5	308 aa	Known RBP	10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	ANGEL1	Q9UNK9	670 aa	Known RBP	10.82	□□□□□ -0.68

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