RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 CASQ1P31415 396 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 TXNRD1Q16881 649 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
LINC01539-201ENST00000587904 GYG1P46976 350 aa11.19□□□□□ -0.62
LINC01539-201ENST00000587904 NCBP1Q09161 790 aaKnown RBP11.19□□□□□ -0.62
LINC01539-201ENST00000587904 FAM84BQ96KN1 310 aaPredicted RBP11.19□□□□□ -0.62
LINC01539-201ENST00000587904 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
LINC01539-201ENST00000587904 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
LINC01539-201ENST00000587904 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
LINC01539-201ENST00000587904 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 UVSSAQ2YD98 709 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 NAPBQ9H115 298 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 CNNM2Q9H8M5 875 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 CHD4Q14839 1912 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 A0A0G2JLW4 131 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 PRC1O43663 620 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 HAND2P61296 217 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 STK3Q13188 491 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
LINC01539-201ENST00000587904 IFNL3Q8IZI9 196 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 FLAD1Q8NFF5 587 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 XDHP47989 1333 aa11.18□□□□□ -0.62
LINC01539-201ENST00000587904 NRXN2Q9P2S2 1712 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 VPS37CA5D8V6 355 aaPredicted RBP11.17□□□□□ -0.62
LINC01539-201ENST00000587904 ERICH4A6NGS2 130 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 SERPINB2P05120 415 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 TPM3P06753 285 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 SCRN1Q12765 414 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 RBM17Q96I25 401 aaKnown RBP11.17□□□□□ -0.62
LINC01539-201ENST00000587904 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 LRRC2Q9BYS8 371 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
LINC01539-201ENST00000587904 GSG1L2A8MUP6 293 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 CYP7A1P22680 504 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 TBC1D10CQ8IV04 446 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 ARMT1Q9H993 441 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 EPB41L4AQ9HCS5 686 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 MED4Q9NPJ6 270 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 TNS1Q9HBL0 1735 aaKnown RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 KLRG2A4D1S0 409 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 PDIA3P30101 505 aaKnown RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 HOXA10P31260 410 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 TDO2P48775 406 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 NAA16Q6N069 864 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 GIMAP6Q6P9H5 292 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 LCORLQ8N3X6 602 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 NSUN7Q8NE18 718 aaKnown RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 KRT23Q9C075 422 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
LINC01539-201ENST00000587904 ABCF2Q9UG63 623 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
LINC01539-201ENST00000587904 POLRMTO00411 1230 aaKnown RBP11.15□□□□□ -0.62
LINC01539-201ENST00000587904 ANTXR2P58335 489 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 PROM2Q8N271 834 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 CCDC24Q8N4L8 307 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 ZNF397Q8NF99 534 aaPredicted RBP11.15□□□□□ -0.62
LINC01539-201ENST00000587904 GPT2Q8TD30 523 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 STAG1Q8WVM7 1258 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 ANKIB1Q9P2G1 1089 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.62
LINC01539-201ENST00000587904 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
LINC01539-201ENST00000587904 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 EP400Q96L91 3159 aa11.15□□□□□ -0.62
LINC01539-201ENST00000587904 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 BBOX1O75936 387 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.63
LINC01539-201ENST00000587904 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 EP400NLQ6ZTU2 488 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 ZNF804AQ7Z570 1209 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 NLGN1Q8N2Q7 840 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 AKT1S1Q96B36 256 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 CRAMP1Q96RY5 1269 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.63
LINC01539-201ENST00000587904 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
LINC01539-201ENST00000587904 JAK2O60674 1132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms