RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-205ENST00000587888 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
ERCC1-205ENST00000587888 DDX4Q9NQI0 724 aaKnown RBP17.52■□□□□ 0.4
ERCC1-205ENST00000587888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-205ENST00000587888 GAKO14976 1311 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 PTPRAP18433 802 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 OSBPP22059 807 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 MECOMQ03112 1051 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
ERCC1-205ENST00000587888 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 SCYL3Q8IZE3 742 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 RAET1EQ8TD07 263 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-205ENST00000587888 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
ERCC1-205ENST00000587888 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
ERCC1-205ENST00000587888 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
ERCC1-205ENST00000587888 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
ERCC1-205ENST00000587888 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
ERCC1-205ENST00000587888 PARK7Q99497 189 aaKnown RBP17.5■□□□□ 0.39
ERCC1-205ENST00000587888 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
ERCC1-205ENST00000587888 AFG3L2Q9Y4W6 797 aa17.5■□□□□ 0.39
ERCC1-205ENST00000587888 ADGRA2Q96PE1 1338 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 ZBTB22O15209 634 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 BCAR3O75815 825 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 MTFR1Q15390 333 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
ERCC1-205ENST00000587888 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
ERCC1-205ENST00000587888 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
ERCC1-205ENST00000587888 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 MYPNQ86TC9 1320 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 A0A0G2JLL6 359 aaPredicted RBP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 GNAI2P04899 355 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 TRIM27P14373 513 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 GRK4P32298 578 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 MTX1Q13505 466 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 PI16Q6UXB8 463 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 PRRT2Q7Z6L0 340 aaPredicted RBP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 RAI14Q9P0K7 980 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
ERCC1-205ENST00000587888 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
ERCC1-205ENST00000587888 HTTP42858 3142 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 LDHCP07864 332 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 BCRP11274 1271 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 FCGRTP55899 365 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
ERCC1-205ENST00000587888 ZNF384Q8TF68 577 aa17.47■□□□□ 0.39
ERCC1-205ENST00000587888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERCC1-205ENST00000587888 FAM196BA6NMK8 535 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 RHBDL3P58872 404 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 GSTO1P78417 241 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 PRKCZQ05513 592 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
ERCC1-205ENST00000587888 RFX7Q2KHR2 1363 aa17.45■□□□□ 0.38
ERCC1-205ENST00000587888 NSUN4Q96CB9 384 aaKnown RBP17.45■□□□□ 0.38
ERCC1-205ENST00000587888 RNF208Q9H0X6 261 aa17.45■□□□□ 0.38
ERCC1-205ENST00000587888 LRP2BPQ9P2M1 347 aa17.45■□□□□ 0.38
ERCC1-205ENST00000587888 CCL5P13501 91 aa17.44■□□□□ 0.38
ERCC1-205ENST00000587888 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
ERCC1-205ENST00000587888 DPF3Q92784 378 aa17.44■□□□□ 0.38
ERCC1-205ENST00000587888 COLQQ9Y215 455 aaPredicted RBP17.44■□□□□ 0.38
ERCC1-205ENST00000587888 H0YGN5 161 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 TBC1D12O60347 775 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
ERCC1-205ENST00000587888 MCAMP43121 646 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 UBXN2AP68543 259 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 NKX2-3Q8TAU0 364 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 SNRKQ9NRH2 765 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
ERCC1-205ENST00000587888 ADCY3O60266 1144 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
ERCC1-205ENST00000587888 UQCRFS1P1P0C7P4 283 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 SPP2Q13103 211 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 TEX11Q8IYF3 940 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 TMEM57Q8N5G2 664 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-205ENST00000587888 NOL10Q9BSC4 688 aaKnown RBP17.42■□□□□ 0.38
ERCC1-205ENST00000587888 OSBPL5Q9H0X9 879 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-205ENST00000587888 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 CENPFP49454 3210 aa17.42■□□□□ 0.38
ERCC1-205ENST00000587888 TNPO2O14787 897 aaKnown RBP17.41■□□□□ 0.38
ERCC1-205ENST00000587888 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-205ENST00000587888 GJB1P08034 283 aa17.41■□□□□ 0.38
ERCC1-205ENST00000587888 GJA8P48165 433 aa17.41■□□□□ 0.38
ERCC1-205ENST00000587888 FLT3LGP49771 235 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms