RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 IGDCC4Q8TDY8 1250 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 UBAC1Q9BSL1 405 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 JAG2Q9Y219 1238 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 GPR75-ASB3A0A0A6YYF3 556 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 PTPDC1A2A3K4 754 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 CCDC69A6NI79 296 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 NCLP19338 710 aaKnown RBP19.86■□□□□ 0.77
NFIX-209ENST00000587760 USP5P45974 858 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 CCT2P78371 535 aaKnown RBP19.86■□□□□ 0.77
NFIX-209ENST00000587760 KLHL40Q2TBA0 621 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 FOXD4L5Q5VV16 416 aaPredicted RBP19.86■□□□□ 0.77
NFIX-209ENST00000587760 CTR9Q6PD62 1173 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 NFXL1Q6ZNB6 911 aa19.86■□□□□ 0.77
NFIX-209ENST00000587760 FOXD4L4Q8WXT5 416 aaPredicted RBP19.86■□□□□ 0.77
NFIX-209ENST00000587760 RTFDC1Q9BY42 306 aaPredicted RBP19.86■□□□□ 0.77
NFIX-209ENST00000587760 LAMB1P07942 1786 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 USP17L12C9JPN9 530 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 USP17L21D6R901 530 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 H3BQV1 296 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 RIMBP2O15034 1052 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 ZBTB43O43298 467 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 ORC4O43929 436 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 MBD3O95983 291 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 FKBP1AP62942 108 aaKnown RBP19.85■□□□□ 0.77
NFIX-209ENST00000587760 PDE4BQ07343 736 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 PPP2R5BQ15173 497 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 RRP12Q5JTH9 1297 aaKnown RBP19.85■□□□□ 0.77
NFIX-209ENST00000587760 IFFO2Q5TF58 517 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 IQCA1Q86XH1 822 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 ZSCAN16Q9H4T2 348 aaPredicted RBP19.85■□□□□ 0.77
NFIX-209ENST00000587760 LMBRD1Q9NUN5 540 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 BRPF3Q9ULD4 1205 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 GAKO14976 1311 aa19.85■□□□□ 0.77
NFIX-209ENST00000587760 METAP2P50579 478 aaKnown RBP eCLIP19.84■□□□□ 0.77
NFIX-209ENST00000587760 GTF2IP78347 998 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 NID2Q14112 1375 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 WTAPQ15007 396 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 APOA5Q6Q788 366 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 LY9Q9HBG7 655 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 ZNF287Q9HBT7 754 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 SLC12A7Q9Y666 1083 aa19.84■□□□□ 0.77
NFIX-209ENST00000587760 DDX49Q9Y6V7 483 aaKnown RBP19.84■□□□□ 0.77
NFIX-209ENST00000587760 MYH2Q9UKX2 1941 aa19.83■□□□□ 0.77
NFIX-209ENST00000587760 CCDC196A0A1B0GTZ2 297 aa19.83■□□□□ 0.76
NFIX-209ENST00000587760 JAK2O60674 1132 aa19.83■□□□□ 0.76
NFIX-209ENST00000587760 HPS5Q9UPZ3 1129 aa19.83■□□□□ 0.76
NFIX-209ENST00000587760 PRPF40AO75400 957 aaKnown RBP19.82■□□□□ 0.76
NFIX-209ENST00000587760 CTDNEP1O95476 244 aa19.82■□□□□ 0.76
NFIX-209ENST00000587760 DIXDC1Q155Q3 683 aa19.82■□□□□ 0.76
NFIX-209ENST00000587760 CCDC178Q5BJE1 867 aa19.82■□□□□ 0.76
NFIX-209ENST00000587760 GPHNQ9NQX3 736 aaPredicted RBP19.82■□□□□ 0.76
NFIX-209ENST00000587760 MCM9Q9NXL9 1143 aa19.82■□□□□ 0.76
NFIX-209ENST00000587760 ROBO3Q96MS0 1386 aa19.81■□□□□ 0.76
NFIX-209ENST00000587760 DLEC1Q9Y238 1755 aa19.81■□□□□ 0.76
NFIX-209ENST00000587760 CHRNA5P30532 468 aa19.81■□□□□ 0.76
NFIX-209ENST00000587760 BTDP43251 543 aa19.81■□□□□ 0.76
NFIX-209ENST00000587760 SH3RF3Q8TEJ3 882 aaPredicted RBP19.81■□□□□ 0.76
NFIX-209ENST00000587760 C7orf43Q8WVR3 580 aa19.81■□□□□ 0.76
NFIX-209ENST00000587760 NCOA5Q9HCD5 579 aaKnown RBP19.81■□□□□ 0.76
NFIX-209ENST00000587760 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
NFIX-209ENST00000587760 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
NFIX-209ENST00000587760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
NFIX-209ENST00000587760 BAZ2AQ9UIF9 1905 aaKnown RBP19.8■□□□□ 0.76
NFIX-209ENST00000587760 KRT85P78386 507 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 C12orf60Q5U649 245 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 TTLL6Q8N841 843 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 MRIQ9BWK5 157 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 SLX4Q8IY92 1834 aa19.8■□□□□ 0.76
NFIX-209ENST00000587760 GOLGA8AA7E2F4 631 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 CALM1P0DP23 149 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 CALM2P0DP24 149 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 CALM3P0DP25 149 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 GRIK5Q16478 980 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 SOGA3Q5TF21 947 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 STRIP1Q5VSL9 837 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 ATL3Q6DD88 541 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 CDC37L1Q7L3B6 337 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 TEX11Q8IYF3 940 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 RTKN2Q8IZC4 609 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
NFIX-209ENST00000587760 RANBP6O60518 1105 aaKnown RBP19.79■□□□□ 0.76
NFIX-209ENST00000587760 CCDC93Q567U6 631 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 HHIPL2Q6UWX4 724 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 ORC3Q9UBD5 711 aaPredicted RBP19.79■□□□□ 0.76
NFIX-209ENST00000587760 TACC3Q9Y6A5 838 aa19.79■□□□□ 0.76
NFIX-209ENST00000587760 TNKSO95271 1327 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 STK36Q9NRP7 1315 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 NAV1Q8NEY1 1877 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 POLR3DP05423 398 aaPredicted RBP19.78■□□□□ 0.76
NFIX-209ENST00000587760 POLD1P28340 1107 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 HDLBPQ00341 1268 aaKnown RBP19.78■□□□□ 0.76
NFIX-209ENST00000587760 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 DOK7Q18PE1 504 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 MICU3Q86XE3 530 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 TGFBRAP1Q8WUH2 860 aa19.78■□□□□ 0.76
NFIX-209ENST00000587760 WASF1Q92558 559 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms