RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 EAF2Q96CJ1 260 aaPredicted RBP28.56■■■□□ 2.16
LSM7-204ENST00000587502 NOL10Q9BSC4 688 aaKnown RBP28.56■■■□□ 2.16
LSM7-204ENST00000587502 CCDC8Q9H0W5 538 aaPredicted RBP28.56■■■□□ 2.16
LSM7-204ENST00000587502 CCDC85CA6NKD9 419 aa28.55■■■□□ 2.16
LSM7-204ENST00000587502 PPATQ06203 517 aa28.55■■■□□ 2.16
LSM7-204ENST00000587502 PPIL2Q13356 520 aa28.55■■■□□ 2.16
LSM7-204ENST00000587502 ZFPM1Q8IX07 1006 aa28.55■■■□□ 2.16
LSM7-204ENST00000587502 SNRKQ9NRH2 765 aa28.55■■■□□ 2.16
LSM7-204ENST00000587502 CCL15-CCL14A0A0B4J2E2 113 aa28.54■■■□□ 2.16
LSM7-204ENST00000587502 CETPP11597 493 aa28.54■■■□□ 2.16
LSM7-204ENST00000587502 RHBDL3P58872 404 aa28.54■■■□□ 2.16
LSM7-204ENST00000587502 CCL15Q16663 113 aa28.54■■■□□ 2.16
LSM7-204ENST00000587502 NAA16Q6N069 864 aaPredicted RBP28.54■■■□□ 2.16
LSM7-204ENST00000587502 PTPN18Q99952 460 aa28.54■■■□□ 2.16
LSM7-204ENST00000587502 BAG3O95817 575 aa28.53■■■□□ 2.16
LSM7-204ENST00000587502 INPP5BP32019 993 aa28.53■■■□□ 2.16
LSM7-204ENST00000587502 SNAPC2Q13487 334 aa28.53■■■□□ 2.16
LSM7-204ENST00000587502 NOL9Q5SY16 702 aaKnown RBP28.53■■■□□ 2.16
LSM7-204ENST00000587502 R3HDMLQ9H3Y0 253 aa28.53■■■□□ 2.16
LSM7-204ENST00000587502 CYP2E1P05181 493 aaPredicted RBP28.52■■■□□ 2.16
LSM7-204ENST00000587502 PLCG2P16885 1265 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 PICALMQ13492 652 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 AACSQ86V21 672 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 RHPN1Q8TCX5 695 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 BRI3BPQ8WY22 251 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 KIF1BPQ96EK5 621 aa28.52■■■□□ 2.16
LSM7-204ENST00000587502 DDX4Q9NQI0 724 aaKnown RBP28.52■■■□□ 2.16
LSM7-204ENST00000587502 TLR7Q9NYK1 1049 aaKnown RBP28.52■■■□□ 2.16
LSM7-204ENST00000587502 ZAP70P43403 619 aa28.51■■■□□ 2.15
LSM7-204ENST00000587502 MAP3K10Q02779 954 aa28.51■■■□□ 2.15
LSM7-204ENST00000587502 CLASRPQ8N2M8 674 aaKnown RBP28.51■■■□□ 2.15
LSM7-204ENST00000587502 ZCCHC17Q9NP64 241 aaKnown RBP28.51■■■□□ 2.15
LSM7-204ENST00000587502 IRF6O14896 467 aa28.5■■■□□ 2.15
LSM7-204ENST00000587502 RAB11FIP3O75154 756 aa28.5■■■□□ 2.15
LSM7-204ENST00000587502 CRHR2Q13324 411 aa28.5■■■□□ 2.15
LSM7-204ENST00000587502 ATRNL1Q5VV63 1379 aa28.5■■■□□ 2.15
LSM7-204ENST00000587502 DDTLA6NHG4 134 aaPredicted RBP28.49■■■□□ 2.15
LSM7-204ENST00000587502 TMED8Q6PL24 325 aaPredicted RBP28.49■■■□□ 2.15
LSM7-204ENST00000587502 SH3BP5LQ7L8J4 393 aa28.49■■■□□ 2.15
LSM7-204ENST00000587502 TEX11Q8IYF3 940 aa28.49■■■□□ 2.15
LSM7-204ENST00000587502 ZFYVE28Q9HCC9 887 aa28.49■■■□□ 2.15
LSM7-204ENST00000587502 PPP4CP60510 307 aa28.48■■■□□ 2.15
LSM7-204ENST00000587502 SIRT2Q8IXJ6 389 aa28.48■■■□□ 2.15
LSM7-204ENST00000587502 DOCK2Q92608 1830 aa28.48■■■□□ 2.15
LSM7-204ENST00000587502 PHF20L1A8MW92 1017 aa28.47■■■□□ 2.15
LSM7-204ENST00000587502 TBC1D12O60347 775 aa28.47■■■□□ 2.15
LSM7-204ENST00000587502 ERO1AQ96HE7 468 aa28.47■■■□□ 2.15
LSM7-204ENST00000587502 IL1RAPL2Q9NP60 686 aa28.47■■■□□ 2.15
LSM7-204ENST00000587502 PICK1Q9NRD5 415 aa28.47■■■□□ 2.15
LSM7-204ENST00000587502 COL2A1P02458 1487 aaPredicted RBP28.46■■■□□ 2.15
LSM7-204ENST00000587502 TAF1CQ15572 869 aaPredicted RBP28.46■■■□□ 2.15
LSM7-204ENST00000587502 C20orf194Q5TEA3 1177 aa28.46■■■□□ 2.15
LSM7-204ENST00000587502 SCYL3Q8IZE3 742 aa28.46■■■□□ 2.15
LSM7-204ENST00000587502 OSBPL5Q9H0X9 879 aaPredicted RBP28.46■■■□□ 2.15
LSM7-204ENST00000587502 KCNH4Q9UQ05 1017 aa28.46■■■□□ 2.15
LSM7-204ENST00000587502 MAST2Q6P0Q8 1798 aa28.46■■■□□ 2.15
LSM7-204ENST00000587502 CTNND1O60716 968 aaKnown RBP28.45■■■□□ 2.14
LSM7-204ENST00000587502 CERS3Q8IU89 383 aa28.45■■■□□ 2.14
LSM7-204ENST00000587502 FAM43AQ8N2R8 423 aa28.45■■■□□ 2.14
LSM7-204ENST00000587502 PIH1D3Q9NQM4 214 aaKnown RBP28.45■■■□□ 2.14
LSM7-204ENST00000587502 AATFQ9NY61 560 aaKnown RBP eCLIP28.45■■■□□ 2.14
LSM7-204ENST00000587502 IFIT2P09913 472 aaKnown RBP28.44■■■□□ 2.14
LSM7-204ENST00000587502 FBXO46Q6PJ61 603 aaPredicted RBP28.44■■■□□ 2.14
LSM7-204ENST00000587502 SH3RF3Q8TEJ3 882 aaPredicted RBP28.44■■■□□ 2.14
LSM7-204ENST00000587502 DHX36Q9H2U1 1008 aaKnown RBP28.44■■■□□ 2.14
LSM7-204ENST00000587502 APBB1O00213 710 aa28.43■■■□□ 2.14
LSM7-204ENST00000587502 CXCL11O14625 94 aa28.43■■■□□ 2.14
LSM7-204ENST00000587502 IDH1O75874 414 aaKnown RBP28.43■■■□□ 2.14
LSM7-204ENST00000587502 SP3Q02447 781 aa28.43■■■□□ 2.14
LSM7-204ENST00000587502 MAP3K12Q12852 859 aa28.43■■■□□ 2.14
LSM7-204ENST00000587502 TTF1Q15361 905 aaPredicted RBP28.43■■■□□ 2.14
LSM7-204ENST00000587502 BTBD19C9JJ37 291 aa28.42■■■□□ 2.14
LSM7-204ENST00000587502 ARHGEF6Q15052 776 aa28.42■■■□□ 2.14
LSM7-204ENST00000587502 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.42■■■□□ 2.14
LSM7-204ENST00000587502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.42■■■□□ 2.14
LSM7-204ENST00000587502 PCDH10Q9P2E7 1040 aa28.42■■■□□ 2.14
LSM7-204ENST00000587502 CYP7A1P22680 504 aa28.41■■■□□ 2.14
LSM7-204ENST00000587502 PI4KBQ9UBF8 816 aa28.41■■■□□ 2.14
LSM7-204ENST00000587502 HPS5Q9UPZ3 1129 aa28.41■■■□□ 2.14
LSM7-204ENST00000587502 PTPRAP18433 802 aa28.4■■■□□ 2.14
LSM7-204ENST00000587502 ANKRD23Q86SG2 305 aa28.4■■■□□ 2.14
LSM7-204ENST00000587502 HERC5Q9UII4 1024 aaKnown RBP28.4■■■□□ 2.14
LSM7-204ENST00000587502 TRIM17Q9Y577 477 aa28.4■■■□□ 2.14
LSM7-204ENST00000587502 ZHX2Q9Y6X8 837 aa28.4■■■□□ 2.14
LSM7-204ENST00000587502 RGS19P49795 217 aa28.39■■■□□ 2.14
LSM7-204ENST00000587502 ADGRA1Q86SQ6 560 aa28.39■■■□□ 2.14
LSM7-204ENST00000587502 TGFBRAP1Q8WUH2 860 aa28.39■■■□□ 2.14
LSM7-204ENST00000587502 TLR2O60603 784 aa28.38■■■□□ 2.13
LSM7-204ENST00000587502 FASTKD5Q7L8L6 764 aaKnown RBP28.38■■■□□ 2.13
LSM7-204ENST00000587502 MAGEB6Q8N7X4 407 aa28.38■■■□□ 2.13
LSM7-204ENST00000587502 OTOP1Q7RTM1 612 aa28.37■■■□□ 2.13
LSM7-204ENST00000587502 CD99L2Q8TCZ2 262 aa28.37■■■□□ 2.13
LSM7-204ENST00000587502 EFCC1Q9HA90 598 aa28.37■■■□□ 2.13
LSM7-204ENST00000587502 MYO5AQ9Y4I1 1855 aaKnown RBP28.36■■■□□ 2.13
LSM7-204ENST00000587502 TBC1D2Q9BYX2 928 aa28.36■■■□□ 2.13
LSM7-204ENST00000587502 LRRCC1Q9C099 1032 aa28.36■■■□□ 2.13
LSM7-204ENST00000587502 ANTXR1Q9H6X2 564 aa28.36■■■□□ 2.13
LSM7-204ENST00000587502 AFG3L2Q9Y4W6 797 aa28.36■■■□□ 2.13
LSM7-204ENST00000587502 NDUFB9Q9Y6M9 179 aa28.36■■■□□ 2.13
LSM7-204ENST00000587502 FLT1P17948 1338 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms