RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 ZSWIM9Q86XI8 627 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 FLAD1Q8NFF5 587 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 LGR6Q9HBX8 967 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 AMOTL2Q9Y2J4 779 aa7.56□□□□□ -1.2
ZNF540-204ENST00000586792 A0A096LPE4 126 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 B8ZZF3 427 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 CTSBP07858 339 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 AOC3Q16853 763 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 PEAR1Q5VY43 1037 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-204ENST00000586792 ANKLE2Q86XL3 938 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 CILP2Q8IUL8 1156 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
ZNF540-204ENST00000586792 TTBK1Q5TCY1 1321 aaPredicted RBP7.54□□□□□ -1.2
ZNF540-204ENST00000586792 TMEM265A0A087WTH1 108 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 AOC2O75106 756 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 FAM87AP0C7U9 286 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 USP5P45974 858 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 MLANAQ16655 118 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 ZNF423Q2M1K9 1284 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 FAM9AQ8IZU1 332 aaPredicted RBP7.54□□□□□ -1.2
ZNF540-204ENST00000586792 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 RAPGEFL1Q9UHV5 662 aa7.54□□□□□ -1.2
ZNF540-204ENST00000586792 METTL12A8MUP2 240 aa7.53□□□□□ -1.2
ZNF540-204ENST00000586792 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
ZNF540-204ENST00000586792 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-204ENST00000586792 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
ZNF540-204ENST00000586792 GOLGA3Q08378 1498 aa7.53□□□□□ -1.2
ZNF540-204ENST00000586792 PRXQ9BXM0 1461 aa7.53□□□□□ -1.2
ZNF540-204ENST00000586792 UGGT2Q9NYU1 1516 aa7.52□□□□□ -1.2
ZNF540-204ENST00000586792 KIAA0556O60303 1618 aa7.52□□□□□ -1.2
ZNF540-204ENST00000586792 TNIKQ9UKE5 1360 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 ATG7O95352 703 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 EIF1AXP47813 144 aaKnown RBP7.52□□□□□ -1.21
ZNF540-204ENST00000586792 PIDD1Q9HB75 910 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 LATS2Q9NRM7 1088 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.52□□□□□ -1.21
ZNF540-204ENST00000586792 POLIQ9UNA4 740 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 PTPRGP23470 1445 aa7.52□□□□□ -1.21
ZNF540-204ENST00000586792 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-204ENST00000586792 CD96P40200 585 aa7.51□□□□□ -1.21
ZNF540-204ENST00000586792 CDK5R2Q13319 367 aa7.51□□□□□ -1.21
ZNF540-204ENST00000586792 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
ZNF540-204ENST00000586792 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
ZNF540-204ENST00000586792 ADCY10Q96PN6 1610 aa7.51□□□□□ -1.21
ZNF540-204ENST00000586792 KIF21BO75037 1637 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 ZNF503-AS2A6NEH8 195 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 CEACAM5P06731 702 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 ATP2B4P23634 1241 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 HNRNPUQ00839 825 aaKnown RBP eCLIP7.5□□□□□ -1.21
ZNF540-204ENST00000586792 AAMPQ13685 434 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 C1QL4Q86Z23 238 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 WDR18Q9BV38 432 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 ATXN3LQ9H3M9 355 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 FOXD3Q9UJU5 478 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-204ENST00000586792 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 DISP1Q96F81 1524 aa7.5□□□□□ -1.21
ZNF540-204ENST00000586792 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
ZNF540-204ENST00000586792 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
ZNF540-204ENST00000586792 ZFYVE28Q9HCC9 887 aa7.49□□□□□ -1.21
ZNF540-204ENST00000586792 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
ZNF540-204ENST00000586792 PPP1R9AQ9ULJ8 1098 aa7.49□□□□□ -1.21
ZNF540-204ENST00000586792 MAPKBP1O60336 1514 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 B3GALT4O96024 378 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 MPSTP25325 297 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 AFMP43652 599 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 SYDE1Q6ZW31 735 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-204ENST00000586792 LIN7BQ9HAP6 207 aa7.48□□□□□ -1.21
ZNF540-204ENST00000586792 ZNF777Q9ULD5 760 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-204ENST00000586792 ABCC2Q92887 1545 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 UACAQ9BZF9 1416 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 ECEL1O95672 775 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 GRIA4P48058 902 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 OXCT1P55809 520 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 SPRED3Q2MJR0 410 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 TTLL10Q6ZVT0 673 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 SMYD4Q8IYR2 804 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-204ENST00000586792 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 LMCD1Q9NZU5 365 aa7.47□□□□□ -1.21
ZNF540-204ENST00000586792 TMPRSS2O15393 492 aa7.46□□□□□ -1.22
ZNF540-204ENST00000586792 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
ZNF540-204ENST00000586792 UHRF1BP1LA0JNW5 1464 aa7.46□□□□□ -1.22
ZNF540-204ENST00000586792 KIF13AQ9H1H9 1805 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 NFIBO00712 420 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 ID3Q02535 119 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 MPZL3Q6UWV2 235 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 LIN37Q96GY3 246 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-204ENST00000586792 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 TCF12Q99081 682 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 PCOLCE2Q9UKZ9 415 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 PLAGL2Q9UPG8 496 aa7.45□□□□□ -1.22
ZNF540-204ENST00000586792 SAMD9Q5K651 1589 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms