RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 MCM9Q9NXL9 1143 aa10.09□□□□□ -0.79
NPC1-204ENST00000586718 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
NPC1-204ENST00000586718 ROBO3Q96MS0 1386 aa10.09□□□□□ -0.79
NPC1-204ENST00000586718 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
NPC1-204ENST00000586718 FLT1P17948 1338 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 SBF1O95248 1867 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
NPC1-204ENST00000586718 AK2P54819 239 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 PDE4BQ07343 736 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 SART3Q15020 963 aaKnown RBP10.08□□□□□ -0.8
NPC1-204ENST00000586718 SBK1Q52WX2 424 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 AKNAD1Q5T1N1 836 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 STOX1Q6ZVD7 989 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
NPC1-204ENST00000586718 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
NPC1-204ENST00000586718 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 TGFBRAP1Q8WUH2 860 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 ZSCAN31Q96LW9 406 aaPredicted RBP10.08□□□□□ -0.8
NPC1-204ENST00000586718 TTC14Q96N46 770 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 KCNQ5Q9NR82 932 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 TAF6LQ9Y6J9 622 aa10.08□□□□□ -0.8
NPC1-204ENST00000586718 NEDD4P46934 1319 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 COL2A1P02458 1487 aaPredicted RBP10.07□□□□□ -0.8
NPC1-204ENST00000586718 PRC1O43663 620 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 MYO1BO43795 1136 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 HLA-DOAP06340 250 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 CPA1P15085 419 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 RHBDL3P58872 404 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 CXCL9Q07325 125 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 PICALMQ13492 652 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 CFAP100Q494V2 611 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
NPC1-204ENST00000586718 MB21D2Q8IYB1 491 aaPredicted RBP10.07□□□□□ -0.8
NPC1-204ENST00000586718 ESR2Q92731 530 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 ALDH8A1Q9H2A2 487 aaPredicted RBP10.07□□□□□ -0.8
NPC1-204ENST00000586718 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
NPC1-204ENST00000586718 USP40Q9NVE5 1235 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
NPC1-204ENST00000586718 ERICH2A1L162 156 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 USP17L21D6R901 530 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 SOCS7O14512 581 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 CD2BP2O95400 341 aaKnown RBP10.06□□□□□ -0.8
NPC1-204ENST00000586718 CTR9Q6PD62 1173 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 Q6ZUG5 572 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 TTC6Q86TZ1 520 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 TMEM87BQ96K49 555 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
NPC1-204ENST00000586718 GJA3Q9Y6H8 435 aa10.06□□□□□ -0.8
NPC1-204ENST00000586718 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 B4E1Z4 1266 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 FZD9O00144 591 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 ORC4O43929 436 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
NPC1-204ENST00000586718 CDC42EP5Q6NZY7 148 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 GMLQ99445 158 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 MTA3Q9BTC8 594 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 OSBPL5Q9H0X9 879 aaPredicted RBP10.05□□□□□ -0.8
NPC1-204ENST00000586718 RNF181Q9P0P0 153 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
NPC1-204ENST00000586718 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 RANBP6O60518 1105 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 KDM4AO75164 1064 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 NPM3O75607 178 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 WDHD1O75717 1129 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 GMPSP49915 693 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 GPR162Q16538 588 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 TMEM67Q5HYA8 995 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 ZSCAN29Q8IWY8 852 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 STK11IPQ8N1F8 1099 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 BRF1Q92994 677 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 TCEANC2Q96MN5 208 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 DHX36Q9H2U1 1008 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 MKNK2Q9HBH9 465 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 NAP1L2Q9ULW6 460 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 ANGEL1Q9UNK9 670 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 ZNF541Q9H0D2 1346 aa10.04□□□□□ -0.8
NPC1-204ENST00000586718 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
NPC1-204ENST00000586718 CYP2D7A0A087X1C5 515 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 TSPY2A6NKD2 308 aa10.03□□□□□ -0.8
NPC1-204ENST00000586718 GOLGA8BA8MQT2 603 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms