RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
HMG20B-215ENST00000585741 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
HMG20B-215ENST00000585741 USP48Q86UV5 1035 aa20.23■□□□□ 0.83
HMG20B-215ENST00000585741 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
HMG20B-215ENST00000585741 ZDHHC15Q96MV8 337 aa20.23■□□□□ 0.83
HMG20B-215ENST00000585741 ZIC5Q96T25 663 aa20.23■□□□□ 0.83
HMG20B-215ENST00000585741 NACAP1Q9BZK3 213 aa20.23■□□□□ 0.83
HMG20B-215ENST00000585741 MYO5AQ9Y4I1 1855 aaKnown RBP20.23■□□□□ 0.83
HMG20B-215ENST00000585741 MCCP23508 829 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 USP5P45974 858 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 PPP4CP60510 307 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 TEX11Q8IYF3 940 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
HMG20B-215ENST00000585741 ZNF408Q9H9D4 720 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 MYOZ2Q9NPC6 264 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
HMG20B-215ENST00000585741 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
HMG20B-215ENST00000585741 BEGAINQ9BUH8 593 aa20.21■□□□□ 0.83
HMG20B-215ENST00000585741 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
HMG20B-215ENST00000585741 TDO2P48775 406 aa20.2■□□□□ 0.82
HMG20B-215ENST00000585741 ZNF280AP59817 542 aaPredicted RBP20.2■□□□□ 0.82
HMG20B-215ENST00000585741 KIF4BQ2VIQ3 1234 aa20.2■□□□□ 0.82
HMG20B-215ENST00000585741 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
HMG20B-215ENST00000585741 AMOTL1Q8IY63 956 aa20.2■□□□□ 0.82
HMG20B-215ENST00000585741 SH3RF3Q8TEJ3 882 aaPredicted RBP20.2■□□□□ 0.82
HMG20B-215ENST00000585741 DSCC1Q9BVC3 393 aa20.2■□□□□ 0.82
HMG20B-215ENST00000585741 RPAP1Q9BWH6 1393 aaPredicted RBP20.2■□□□□ 0.82
HMG20B-215ENST00000585741 MYH2Q9UKX2 1941 aa20.19■□□□□ 0.82
HMG20B-215ENST00000585741 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
HMG20B-215ENST00000585741 APOBEC3HQ6NTF7 200 aaKnown RBP20.19■□□□□ 0.82
HMG20B-215ENST00000585741 NAPBQ9H115 298 aa20.19■□□□□ 0.82
HMG20B-215ENST00000585741 IL25Q9H293 177 aa20.19■□□□□ 0.82
HMG20B-215ENST00000585741 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
HMG20B-215ENST00000585741 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
HMG20B-215ENST00000585741 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 MTMR14Q8NCE2 650 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 TDRD3Q9H7E2 651 aaKnown RBP20.18■□□□□ 0.82
HMG20B-215ENST00000585741 ATP8A2Q9NTI2 1148 aa20.18■□□□□ 0.82
HMG20B-215ENST00000585741 FAM155AB1AL88 458 aaPredicted RBP20.17■□□□□ 0.82
HMG20B-215ENST00000585741 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
HMG20B-215ENST00000585741 CA12O43570 354 aa20.17■□□□□ 0.82
HMG20B-215ENST00000585741 PRKAB2O43741 272 aa20.17■□□□□ 0.82
HMG20B-215ENST00000585741 PICALMQ13492 652 aa20.17■□□□□ 0.82
HMG20B-215ENST00000585741 SDR42E1Q8WUS8 393 aa20.17■□□□□ 0.82
HMG20B-215ENST00000585741 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
HMG20B-215ENST00000585741 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
HMG20B-215ENST00000585741 VEZTQ9HBM0 779 aa20.17■□□□□ 0.82
HMG20B-215ENST00000585741 POLR2AP24928 1970 aaKnown RBP20.17■□□□□ 0.82
HMG20B-215ENST00000585741 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
HMG20B-215ENST00000585741 ADM5C9JUS6 153 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 SEC24BO95487 1268 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 RGS19P49795 217 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 HUNKP57058 714 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 PTH1RQ03431 593 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 VPS53Q5VIR6 699 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 RNF20Q5VTR2 975 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 IFNL3Q8IZI9 196 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 PCDHAC2Q9Y5I4 1007 aa20.16■□□□□ 0.82
HMG20B-215ENST00000585741 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 WNT10BO00744 389 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 RHBDL3P58872 404 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 NOGQ13253 232 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 IMMTQ16891 758 aaKnown RBP20.15■□□□□ 0.82
HMG20B-215ENST00000585741 GIMAP6Q6P9H5 292 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 MAP4K1Q92918 833 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
HMG20B-215ENST00000585741 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
HMG20B-215ENST00000585741 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
HMG20B-215ENST00000585741 ASTN2O75129 1339 aaPredicted RBP20.15■□□□□ 0.82
HMG20B-215ENST00000585741 CASP8AP2Q9UKL3 1982 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 GSG1L2A8MUP6 293 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
HMG20B-215ENST00000585741 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
HMG20B-215ENST00000585741 TNNI2P48788 182 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 NBPF9Q3BBW0 867 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 MCOLN1Q9GZU1 580 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
HMG20B-215ENST00000585741 TNFAIP1Q13829 316 aa20.13■□□□□ 0.81
HMG20B-215ENST00000585741 ALX1Q15699 326 aa20.13■□□□□ 0.81
HMG20B-215ENST00000585741 RGMBQ6NW40 437 aa20.13■□□□□ 0.81
HMG20B-215ENST00000585741 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
HMG20B-215ENST00000585741 GBA2Q9HCG7 927 aaPredicted RBP20.13■□□□□ 0.81
HMG20B-215ENST00000585741 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
HMG20B-215ENST00000585741 FLT1P17948 1338 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 CCDC85CA6NKD9 419 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 TCP10L2B9ZVM9 353 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 ZNF213O14771 459 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 FGAP02671 866 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 SLC3A2P08195 630 aaKnown RBP20.12■□□□□ 0.81
HMG20B-215ENST00000585741 CACNB3P54284 484 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 SPDYE2Q495Y8 402 aa20.12■□□□□ 0.81
HMG20B-215ENST00000585741 ZSCAN29Q8IWY8 852 aaPredicted RBP20.12■□□□□ 0.81
HMG20B-215ENST00000585741 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
HMG20B-215ENST00000585741 ZMYM6O95789 1325 aa20.11■□□□□ 0.81
HMG20B-215ENST00000585741 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms