RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 UBE3CQ15386 1083 aa16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKCSH-202ENST00000585540 AK9Q5TCS8 1911 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 PDE6AP16499 860 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 INHBEP58166 350 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
PRKCSH-202ENST00000585540 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 ADD2P35612 726 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 MAP3K10Q02779 954 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 TCP10Q12799 353 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 WBP1LQ9NX94 342 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 STAP2Q9UGK3 403 aa16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-202ENST00000585540 NEFLP07196 543 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 SAGE1Q9NXZ1 904 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 ZNF112Q9UJU3 913 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 FLT1P17948 1338 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
PRKCSH-202ENST00000585540 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 HLA-DOAP06340 250 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 NUCB1Q02818 461 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 PICALMQ13492 652 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 PRKG1Q13976 671 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 ADGRA1Q86SQ6 560 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 CHD1LQ86WJ1 897 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 SH3RF3Q8TEJ3 882 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 DDX4Q9NQI0 724 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
PRKCSH-202ENST00000585540 TCRBV5S4A2TA0A5A2 114 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 GRM1Q13255 1194 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 MOB2Q70IA6 237 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 WNK4Q96J92 1243 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
PRKCSH-202ENST00000585540 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 USP5P45974 858 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 PDE1AP54750 535 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 VGLL4Q14135 290 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 B4GALNT3Q6L9W6 998 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 ATP8A2Q9NTI2 1148 aa16.66■□□□□ 0.26
PRKCSH-202ENST00000585540 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 AOC2O75106 756 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 TM4SF4P48230 202 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 PPATQ06203 517 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 APPBP2Q92624 585 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 EHD4Q9H223 541 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-202ENST00000585540 GNAT2P19087 354 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 GTF2A2P52657 109 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 PPIL2Q13356 520 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 SH3BP5LQ7L8J4 393 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 SCYL3Q8IZE3 742 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 CFHR5Q9BXR6 569 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
PRKCSH-202ENST00000585540 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms