RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 USP5P45974 858 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 CACNB3P54284 484 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 PICALMQ13492 652 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-215ENST00000584944 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
TRAF4-215ENST00000584944 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-215ENST00000584944 ADD2P35612 726 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 FKBP1BP68106 108 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 TCP10Q12799 353 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 DGKZQ13574 1117 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
TRAF4-215ENST00000584944 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
TRAF4-215ENST00000584944 MAST2Q6P0Q8 1798 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 RASA3Q14644 834 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
TRAF4-215ENST00000584944 SCAF8Q9UPN6 1271 aaKnown RBP16.67■□□□□ 0.26
TRAF4-215ENST00000584944 TRPA1O75762 1119 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 MBD4O95243 580 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
TRAF4-215ENST00000584944 APPBP2Q92624 585 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
TRAF4-215ENST00000584944 APPP05067 770 aa16.65■□□□□ 0.26
TRAF4-215ENST00000584944 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
TRAF4-215ENST00000584944 PPP4CP60510 307 aa16.65■□□□□ 0.26
TRAF4-215ENST00000584944 DYNLL1P63167 89 aaKnown RBP16.65■□□□□ 0.26
TRAF4-215ENST00000584944 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
TRAF4-215ENST00000584944 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
TRAF4-215ENST00000584944 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
TRAF4-215ENST00000584944 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-215ENST00000584944 ENTPD3O75355 529 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-215ENST00000584944 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 MOB2Q70IA6 237 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-215ENST00000584944 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 ARMT1Q9H993 441 aa16.64■□□□□ 0.25
TRAF4-215ENST00000584944 TCRBV5S4A2TA0A5A2 114 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 HLA-DOAP06340 250 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 GNAT2P19087 354 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 SDSP20132 328 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 MAPKAPK5Q8IW41 473 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
TRAF4-215ENST00000584944 UBE2Q2LH0YL09 131 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 RHBDL3P58872 404 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 NFIAQ12857 509 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 HELLSQ9NRZ9 838 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 RFX7Q2KHR2 1363 aa16.62■□□□□ 0.25
TRAF4-215ENST00000584944 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
TRAF4-215ENST00000584944 WDHD1O75717 1129 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 PRKG1Q13976 671 aa16.61■□□□□ 0.25
TRAF4-215ENST00000584944 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
TRAF4-215ENST00000584944 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
TRAF4-215ENST00000584944 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
TRAF4-215ENST00000584944 CRACR2BQ8N4Y2 399 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
TRAF4-215ENST00000584944 GPAA1O43292 621 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 IREB2P48200 963 aaKnown RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 TDO2P48775 406 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 OSBP2Q969R2 916 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-215ENST00000584944 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
TRAF4-215ENST00000584944 FLT1P17948 1338 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms