RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 FAM43AQ8N2R8 423 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
ITGB4-213ENST00000584939 LAMB1P07942 1786 aa21.03■□□□□ 0.96
ITGB4-213ENST00000584939 DDTLA6NHG4 134 aaPredicted RBP21.03■□□□□ 0.96
ITGB4-213ENST00000584939 TAF1CQ15572 869 aaPredicted RBP21.03■□□□□ 0.96
ITGB4-213ENST00000584939 CCDC8Q9H0W5 538 aaPredicted RBP21.03■□□□□ 0.96
ITGB4-213ENST00000584939 ZFYVE28Q9HCC9 887 aa21.03■□□□□ 0.96
ITGB4-213ENST00000584939 MYH2Q9UKX2 1941 aa21.03■□□□□ 0.96
ITGB4-213ENST00000584939 ATRNL1Q5VV63 1379 aa21.02■□□□□ 0.96
ITGB4-213ENST00000584939 NOL9Q5SY16 702 aaKnown RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 FBXO46Q6PJ61 603 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 EAF2Q96CJ1 260 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 ERO1AQ96HE7 468 aa21.02■□□□□ 0.96
ITGB4-213ENST00000584939 ZNF512BQ96KM6 892 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 TLR7Q9NYK1 1049 aaKnown RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 DBNLQ9UJU6 430 aaKnown RBP21.02■□□□□ 0.96
ITGB4-213ENST00000584939 EXOC6BQ9Y2D4 811 aa21.02■□□□□ 0.96
ITGB4-213ENST00000584939 COG6Q9Y2V7 657 aa21.02■□□□□ 0.96
ITGB4-213ENST00000584939 TRIM17Q9Y577 477 aa21.02■□□□□ 0.96
ITGB4-213ENST00000584939 PHF20L1A8MW92 1017 aa21.01■□□□□ 0.95
ITGB4-213ENST00000584939 BTBD19C9JJ37 291 aa21.01■□□□□ 0.95
ITGB4-213ENST00000584939 MAP4K4O95819 1239 aaPredicted RBP21.01■□□□□ 0.95
ITGB4-213ENST00000584939 SP3Q02447 781 aa21.01■□□□□ 0.95
ITGB4-213ENST00000584939 C20orf194Q5TEA3 1177 aa21.01■□□□□ 0.95
ITGB4-213ENST00000584939 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.01■□□□□ 0.95
ITGB4-213ENST00000584939 CD99L2Q8TCZ2 262 aa21.01■□□□□ 0.95
ITGB4-213ENST00000584939 NPM3O75607 178 aaKnown RBP21■□□□□ 0.95
ITGB4-213ENST00000584939 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
ITGB4-213ENST00000584939 ZAP70P43403 619 aa21■□□□□ 0.95
ITGB4-213ENST00000584939 MAP3K10Q02779 954 aa21■□□□□ 0.95
ITGB4-213ENST00000584939 MLLT1Q03111 559 aaPredicted RBP21■□□□□ 0.95
ITGB4-213ENST00000584939 OTOP1Q7RTM1 612 aa21■□□□□ 0.95
ITGB4-213ENST00000584939 ERC1Q8IUD2 1116 aa21■□□□□ 0.95
ITGB4-213ENST00000584939 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
ITGB4-213ENST00000584939 SOX10P56693 466 aa20.99■□□□□ 0.95
ITGB4-213ENST00000584939 NAA16Q6N069 864 aaPredicted RBP20.99■□□□□ 0.95
ITGB4-213ENST00000584939 NOL10Q9BSC4 688 aaKnown RBP20.99■□□□□ 0.95
ITGB4-213ENST00000584939 ZCCHC17Q9NP64 241 aaKnown RBP20.99■□□□□ 0.95
ITGB4-213ENST00000584939 ZBTB40Q9NUA8 1239 aa20.99■□□□□ 0.95
ITGB4-213ENST00000584939 KCNH4Q9UQ05 1017 aa20.99■□□□□ 0.95
ITGB4-213ENST00000584939 SLURP2P0DP57 97 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 HSP90AB4PQ58FF6 505 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 RPAP2Q8IXW5 612 aaPredicted RBP20.98■□□□□ 0.95
ITGB4-213ENST00000584939 TEX11Q8IYF3 940 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 SCYL3Q8IZE3 742 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 PIH1D3Q9NQM4 214 aaKnown RBP20.98■□□□□ 0.95
ITGB4-213ENST00000584939 PICK1Q9NRD5 415 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 AK9Q5TCS8 1911 aa20.98■□□□□ 0.95
ITGB4-213ENST00000584939 BAG3O95817 575 aa20.97■□□□□ 0.95
ITGB4-213ENST00000584939 AACSQ86V21 672 aa20.97■□□□□ 0.95
ITGB4-213ENST00000584939 SH3RF3Q8TEJ3 882 aaPredicted RBP20.97■□□□□ 0.95
ITGB4-213ENST00000584939 EFCC1Q9HA90 598 aa20.97■□□□□ 0.95
ITGB4-213ENST00000584939 TBC1D12O60347 775 aa20.96■□□□□ 0.95
ITGB4-213ENST00000584939 OSBPL5Q9H0X9 879 aaPredicted RBP20.96■□□□□ 0.95
ITGB4-213ENST00000584939 AATFQ9NY61 560 aaKnown RBP eCLIP20.96■□□□□ 0.95
ITGB4-213ENST00000584939 ZHX2Q9Y6X8 837 aa20.96■□□□□ 0.95
ITGB4-213ENST00000584939 CXCL11O14625 94 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 TLR2O60603 784 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 CTNND1O60716 968 aaKnown RBP20.95■□□□□ 0.94
ITGB4-213ENST00000584939 IGSF3O75054 1194 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 HMMRO75330 724 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 PTPRAP18433 802 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 PPP4CP60510 307 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 CAP1Q01518 475 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 ANKRD23Q86SG2 305 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 ADGRA1Q86SQ6 560 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 RHPN1Q8TCX5 695 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
ITGB4-213ENST00000584939 IL1RAPL2Q9NP60 686 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 PTPN22Q9Y2R2 807 aa20.95■□□□□ 0.94
ITGB4-213ENST00000584939 PDHXO00330 501 aa20.94■□□□□ 0.94
ITGB4-213ENST00000584939 PLCG2P16885 1265 aa20.94■□□□□ 0.94
ITGB4-213ENST00000584939 MOGSQ13724 837 aa20.94■□□□□ 0.94
ITGB4-213ENST00000584939 PDE3AQ14432 1141 aa20.94■□□□□ 0.94
ITGB4-213ENST00000584939 SIRT2Q8IXJ6 389 aa20.94■□□□□ 0.94
ITGB4-213ENST00000584939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.94■□□□□ 0.94
ITGB4-213ENST00000584939 FAM196BA6NMK8 535 aa20.93■□□□□ 0.94
ITGB4-213ENST00000584939 APBB1O00213 710 aa20.93■□□□□ 0.94
ITGB4-213ENST00000584939 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
ITGB4-213ENST00000584939 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
ITGB4-213ENST00000584939 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
ITGB4-213ENST00000584939 CYP7A1P22680 504 aa20.92■□□□□ 0.94
ITGB4-213ENST00000584939 TGFBRAP1Q8WUH2 860 aa20.92■□□□□ 0.94
ITGB4-213ENST00000584939 KIF1BPQ96EK5 621 aa20.92■□□□□ 0.94
ITGB4-213ENST00000584939 AFG3L2Q9Y4W6 797 aa20.92■□□□□ 0.94
ITGB4-213ENST00000584939 COL2A1P02458 1487 aaPredicted RBP20.92■□□□□ 0.94
ITGB4-213ENST00000584939 DOCK2Q92608 1830 aa20.92■□□□□ 0.94
ITGB4-213ENST00000584939 GPAT2Q6NUI2 795 aa20.91■□□□□ 0.94
ITGB4-213ENST00000584939 CLASRPQ8N2M8 674 aaKnown RBP20.91■□□□□ 0.94
ITGB4-213ENST00000584939 DHX36Q9H2U1 1008 aaKnown RBP20.91■□□□□ 0.94
ITGB4-213ENST00000584939 ANTXR1Q9H6X2 564 aa20.91■□□□□ 0.94
ITGB4-213ENST00000584939 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.91■□□□□ 0.94
ITGB4-213ENST00000584939 A0A0G2JLL6 359 aaPredicted RBP20.9■□□□□ 0.94
ITGB4-213ENST00000584939 DYNLL1P63167 89 aaKnown RBP20.9■□□□□ 0.94
ITGB4-213ENST00000584939 KIF22Q14807 665 aa20.9■□□□□ 0.94
ITGB4-213ENST00000584939 FASTKD5Q7L8L6 764 aaKnown RBP20.9■□□□□ 0.94
ITGB4-213ENST00000584939 PRRT2Q7Z6L0 340 aaPredicted RBP20.9■□□□□ 0.94
ITGB4-213ENST00000584939 MAPKAPK5Q8IW41 473 aa20.9■□□□□ 0.94
ITGB4-213ENST00000584939 BCL11AQ9H165 835 aa20.9■□□□□ 0.94
ITGB4-213ENST00000584939 PI4KBQ9UBF8 816 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms