RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 PICK1Q9NRD5 415 aa20.58■□□□□ 0.89
CCDC57-219ENST00000584717 CT47B1P0C2W7 299 aaPredicted RBP20.57■□□□□ 0.88
CCDC57-219ENST00000584717 HOXD10P28358 340 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 GRK4P32298 578 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 PICALMQ13492 652 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 SHISA4Q96DD7 197 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 DDX4Q9NQI0 724 aaKnown RBP20.57■□□□□ 0.88
CCDC57-219ENST00000584717 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 ZHX2Q9Y6X8 837 aa20.57■□□□□ 0.88
CCDC57-219ENST00000584717 MGAMO43451 1857 aa20.56■□□□□ 0.88
CCDC57-219ENST00000584717 DOCK1Q14185 1865 aa20.56■□□□□ 0.88
CCDC57-219ENST00000584717 BCRP11274 1271 aa20.56■□□□□ 0.88
CCDC57-219ENST00000584717 BTDP43251 543 aa20.56■□□□□ 0.88
CCDC57-219ENST00000584717 GADL1Q6ZQY3 521 aa20.56■□□□□ 0.88
CCDC57-219ENST00000584717 COLQQ9Y215 455 aaPredicted RBP20.56■□□□□ 0.88
CCDC57-219ENST00000584717 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-219ENST00000584717 A0A1B0GUL7 405 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 DDTLA6NHG4 134 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-219ENST00000584717 H0YGN5 161 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 PTPRAP18433 802 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 PRKCZQ05513 592 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 TFCP2Q12800 502 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-219ENST00000584717 XAGE2Q96GT9 111 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-219ENST00000584717 PTPRFP10586 1907 aa20.55■□□□□ 0.88
CCDC57-219ENST00000584717 MROH7-TTC4A0A0A0MT08 1334 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 PDS5AQ29RF7 1337 aaKnown RBP20.54■□□□□ 0.88
CCDC57-219ENST00000584717 ZBTB22O15209 634 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCDC57-219ENST00000584717 FCGRTP55899 365 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 FASTKD5Q7L8L6 764 aaKnown RBP20.54■□□□□ 0.88
CCDC57-219ENST00000584717 SLF2Q8IX21 1173 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 BIN2Q9UBW5 565 aaPredicted RBP20.54■□□□□ 0.88
CCDC57-219ENST00000584717 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
CCDC57-219ENST00000584717 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
CCDC57-219ENST00000584717 PHIPQ8WWQ0 1821 aa20.53■□□□□ 0.88
CCDC57-219ENST00000584717 CCL5P13501 91 aa20.53■□□□□ 0.88
CCDC57-219ENST00000584717 RARSP54136 660 aaKnown RBP20.53■□□□□ 0.88
CCDC57-219ENST00000584717 SPTY2D1Q68D10 685 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-219ENST00000584717 CCDC84Q86UT8 332 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-219ENST00000584717 FAM163AQ96GL9 167 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-219ENST00000584717 GABRQQ9UN88 632 aa20.53■□□□□ 0.88
CCDC57-219ENST00000584717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-219ENST00000584717 MAP3K10Q02779 954 aa20.52■□□□□ 0.88
CCDC57-219ENST00000584717 MECOMQ03112 1051 aa20.52■□□□□ 0.88
CCDC57-219ENST00000584717 MVPQ14764 893 aaKnown RBP20.52■□□□□ 0.88
CCDC57-219ENST00000584717 ERICH6Q7L0X2 663 aa20.52■□□□□ 0.88
CCDC57-219ENST00000584717 ZNF384Q8TF68 577 aa20.52■□□□□ 0.88
CCDC57-219ENST00000584717 AKAP2Q9Y2D5 859 aa20.52■□□□□ 0.88
CCDC57-219ENST00000584717 TRIM75PA6NK02 468 aa20.51■□□□□ 0.87
CCDC57-219ENST00000584717 CTNND1O60716 968 aaKnown RBP20.51■□□□□ 0.87
CCDC57-219ENST00000584717 GNAI3P08754 354 aa20.51■□□□□ 0.87
CCDC57-219ENST00000584717 NEUROD6Q96NK8 337 aa20.51■□□□□ 0.87
CCDC57-219ENST00000584717 RNF208Q9H0X6 261 aa20.51■□□□□ 0.87
CCDC57-219ENST00000584717 FAM196BA6NMK8 535 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 GJB1P08034 283 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 GJA8P48165 433 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 RHBDL3P58872 404 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 UBXN2AP68543 259 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 PI16Q6UXB8 463 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 NKX2-3Q8TAU0 364 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 DPF3Q92784 378 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
CCDC57-219ENST00000584717 RANBP2P49792 3224 aaKnown RBP20.5■□□□□ 0.87
CCDC57-219ENST00000584717 GPR75-ASB3A0A0A6YYF3 556 aa20.49■□□□□ 0.87
CCDC57-219ENST00000584717 MTX1Q13505 466 aa20.49■□□□□ 0.87
CCDC57-219ENST00000584717 SLAIN1Q8ND83 568 aa20.49■□□□□ 0.87
CCDC57-219ENST00000584717 SMCR8Q8TEV9 937 aaPredicted RBP20.49■□□□□ 0.87
CCDC57-219ENST00000584717 SLC45A1Q9Y2W3 748 aa20.49■□□□□ 0.87
CCDC57-219ENST00000584717 ADCY3O60266 1144 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 TBC1D9Q6ZT07 1266 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 ARHGAP45Q92619 1136 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 UNC93B1Q9H1C4 597 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
CCDC57-219ENST00000584717 SZT2Q5T011 3432 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 ELNP15502 786 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 FLT3LGP49771 235 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 TREML2Q5T2D2 321 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 CHRDL2Q6WN34 429 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
CCDC57-219ENST00000584717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCDC57-219ENST00000584717 AGTPBP1Q9UPW5 1226 aa20.47■□□□□ 0.87
CCDC57-219ENST00000584717 ATAD5Q96QE3 1844 aa20.46■□□□□ 0.87
CCDC57-219ENST00000584717 TNPO2O14787 897 aaKnown RBP20.46■□□□□ 0.87
CCDC57-219ENST00000584717 GSTO1P78417 241 aa20.46■□□□□ 0.87
CCDC57-219ENST00000584717 UBE2Q1Q7Z7E8 422 aa20.46■□□□□ 0.87
CCDC57-219ENST00000584717 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
CCDC57-219ENST00000584717 RAI14Q9P0K7 980 aa20.46■□□□□ 0.87
CCDC57-219ENST00000584717 TBC1D12O60347 775 aa20.45■□□□□ 0.86
CCDC57-219ENST00000584717 INHAP05111 366 aa20.45■□□□□ 0.86
CCDC57-219ENST00000584717 LDHCP07864 332 aa20.45■□□□□ 0.86
CCDC57-219ENST00000584717 ARID4AP29374 1257 aaPredicted RBP20.45■□□□□ 0.86
CCDC57-219ENST00000584717 ANKRD13CQ8N6S4 541 aa20.45■□□□□ 0.86
CCDC57-219ENST00000584717 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
CCDC57-219ENST00000584717 LOC285556D6RIA3 1793 aa20.44■□□□□ 0.86
CCDC57-219ENST00000584717 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms