RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PSMD1Q99460 953 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 RNF123Q5XPI4 1314 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 CASQ2O14958 399 aaPredicted RBP14.57□□□□□ -0.08
RNF43-208ENST00000584437 GKAP1Q5VSY0 366 aaPredicted RBP14.57□□□□□ -0.08
RNF43-208ENST00000584437 SMC1BQ8NDV3 1235 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
RNF43-208ENST00000584437 ZMYM4Q5VZL5 1548 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 POLR2DO15514 142 aaKnown RBP14.57□□□□□ -0.08
RNF43-208ENST00000584437 GMNNO75496 209 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 SH3BGRP55822 239 aaPredicted RBP14.57□□□□□ -0.08
RNF43-208ENST00000584437 KRT28Q7Z3Y7 464 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 SYCE1Q8N0S2 351 aa14.57□□□□□ -0.08
RNF43-208ENST00000584437 EFCAB8A8MWE9 144 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 TM6SF1Q9BZW5 370 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 WWC3Q9ULE0 1092 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 CD109Q6YHK3 1445 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 MTHFSDQ2M296 383 aaKnown RBP14.56□□□□□ -0.08
RNF43-208ENST00000584437 TCHPQ9BT92 498 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 RASSF2P50749 326 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
RNF43-208ENST00000584437 MAGEB6Q8N7X4 407 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 ANGEL1Q9UNK9 670 aaKnown RBP14.56□□□□□ -0.08
RNF43-208ENST00000584437 NESP48681 1621 aa14.56□□□□□ -0.08
RNF43-208ENST00000584437 CETN3O15182 167 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 PPP2R5BQ15173 497 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 ARHGEF2Q92974 986 aaKnown RBP14.55□□□□□ -0.08
RNF43-208ENST00000584437 USH1CQ9Y6N9 552 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 E7EVH7 732 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 RXRAP19793 462 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 MTX1Q13505 466 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 POSTNQ15063 836 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 PLIN2Q99541 437 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 FLT4P35916 1363 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 MAP3K5Q99683 1374 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 VPS52Q8N1B4 723 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 MAK16Q9BXY0 300 aaKnown RBP14.55□□□□□ -0.08
RNF43-208ENST00000584437 MED4Q9NPJ6 270 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 SAR1BQ9Y6B6 198 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 CEP104O60308 925 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 RNF10Q8N5U6 811 aaKnown RBP14.55□□□□□ -0.08
RNF43-208ENST00000584437 BABAM1Q9NWV8 329 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 MCM9Q9NXL9 1143 aa14.55□□□□□ -0.08
RNF43-208ENST00000584437 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 ZNF131P52739 623 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 HHATQ5VTY9 493 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 FAM173BQ6P4H8 233 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 DIS3L2Q8IYB7 885 aaKnown RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 CEP120Q8N960 986 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 TESK2Q96S53 571 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 PARP2Q9UGN5 583 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 RPS6KA1Q15418 735 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 CWF19L2Q2TBE0 894 aaKnown RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 GOLGA5Q8TBA6 731 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 NPC1L1Q9UHC9 1359 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 CALUO43852 315 aaPredicted RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 FBLN1P23142 703 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 IQSEC3Q9UPP2 1182 aaPredicted RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 RNF40O75150 1001 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 ZNF804AQ7Z570 1209 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 MRFAP1L1Q96HT8 127 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 BICC1Q9H694 974 aaKnown RBP14.54□□□□□ -0.08
RNF43-208ENST00000584437 BAIAP2L1Q9UHR4 511 aa14.54□□□□□ -0.08
RNF43-208ENST00000584437 FLOT1O75955 427 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 UAP1Q16222 522 aaPredicted RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 SLF1Q9BQI6 1058 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 ZWINTO95229 277 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 HSPA1LP34931 641 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 ETF1P62495 437 aaKnown RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 LETM2Q2VYF4 491 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 KRT71Q3SY84 523 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 LIN9Q5TKA1 542 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 SDCCAG8Q86SQ7 713 aaPredicted RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 NLRP3Q96P20 1036 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 CC2D2AQ9P2K1 1620 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 ZNF853P0CG23 659 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 WDR44Q5JSH3 913 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 TTC38Q5R3I4 469 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 CDC37L1Q7L3B6 337 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 OTUD7AQ8TE49 926 aaPredicted RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 FAM204AQ9H8W3 233 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 TAB2Q9NYJ8 693 aa14.53□□□□□ -0.08
RNF43-208ENST00000584437 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
RNF43-208ENST00000584437 PARP1P09874 1014 aaKnown RBP14.52□□□□□ -0.08
RNF43-208ENST00000584437 SLC8A1P32418 973 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.08
RNF43-208ENST00000584437 ZKSCAN3Q9BRR0 538 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 KLHL7Q8IXQ5 586 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms