RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 LAMB1P07942 1786 aa26.29■■□□□ 1.8
PPP4R1-228ENST00000584074 ZAP70P43403 619 aa26.29■■□□□ 1.8
PPP4R1-228ENST00000584074 GTF2A2P52657 109 aa26.29■■□□□ 1.8
PPP4R1-228ENST00000584074 OTUD7BQ6GQQ9 843 aa26.29■■□□□ 1.8
PPP4R1-228ENST00000584074 ZSCAN29Q8IWY8 852 aaPredicted RBP26.29■■□□□ 1.8
PPP4R1-228ENST00000584074 CCL15-CCL14A0A0B4J2E2 113 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 FKTNO75072 461 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 PDE3AQ14432 1141 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 CCL15Q16663 113 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 AACSQ86V21 672 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 ATRNL1Q5VV63 1379 aa26.28■■□□□ 1.8
PPP4R1-228ENST00000584074 DDTLA6NHG4 134 aaPredicted RBP26.27■■□□□ 1.8
PPP4R1-228ENST00000584074 IRF6O14896 467 aa26.27■■□□□ 1.8
PPP4R1-228ENST00000584074 CRHR2Q13324 411 aa26.27■■□□□ 1.8
PPP4R1-228ENST00000584074 HSP90AB4PQ58FF6 505 aa26.27■■□□□ 1.8
PPP4R1-228ENST00000584074 IL1RAPL2Q9NP60 686 aa26.27■■□□□ 1.8
PPP4R1-228ENST00000584074 APBB1O00213 710 aa26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 HMMRO75330 724 aa26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 SLURP2P0DP57 97 aa26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 PPIL2Q13356 520 aa26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 NAA16Q6N069 864 aaPredicted RBP26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 RHPN1Q8TCX5 695 aa26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 CHMP4BQ9H444 224 aaKnown RBP26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 PIH1D3Q9NQM4 214 aaKnown RBP26.26■■□□□ 1.79
PPP4R1-228ENST00000584074 PHF20L1A8MW92 1017 aa26.24■■□□□ 1.79
PPP4R1-228ENST00000584074 MAP4K4O95819 1239 aaPredicted RBP26.24■■□□□ 1.79
PPP4R1-228ENST00000584074 PPATQ06203 517 aa26.24■■□□□ 1.79
PPP4R1-228ENST00000584074 FAM43AQ8N2R8 423 aa26.24■■□□□ 1.79
PPP4R1-228ENST00000584074 NDUFB9Q9Y6M9 179 aa26.24■■□□□ 1.79
PPP4R1-228ENST00000584074 NPM3O75607 178 aaKnown RBP26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 CETPP11597 493 aa26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 MAP3K10Q02779 954 aa26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 SNAPC2Q13487 334 aa26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 NOL9Q5SY16 702 aaKnown RBP26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 ADGRA1Q86SQ6 560 aa26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 SH3RF3Q8TEJ3 882 aaPredicted RBP26.23■■□□□ 1.79
PPP4R1-228ENST00000584074 TEX11Q8IYF3 940 aa26.22■■□□□ 1.79
PPP4R1-228ENST00000584074 KIF1BPQ96EK5 621 aa26.22■■□□□ 1.79
PPP4R1-228ENST00000584074 NOL10Q9BSC4 688 aaKnown RBP26.22■■□□□ 1.79
PPP4R1-228ENST00000584074 AATFQ9NY61 560 aaKnown RBP eCLIP26.22■■□□□ 1.79
PPP4R1-228ENST00000584074 AK9Q5TCS8 1911 aa26.22■■□□□ 1.79
PPP4R1-228ENST00000584074 BCL11AQ9H165 835 aa26.21■■□□□ 1.79
PPP4R1-228ENST00000584074 BAG3O95817 575 aa26.2■■□□□ 1.78
PPP4R1-228ENST00000584074 OSBPL5Q9H0X9 879 aaPredicted RBP26.2■■□□□ 1.78
PPP4R1-228ENST00000584074 DOCK2Q92608 1830 aa26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 BTBD19C9JJ37 291 aa26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 IDH1O75874 414 aaKnown RBP26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 PPP4CP60510 307 aa26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 TAF1CQ15572 869 aaPredicted RBP26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 PKN2Q16513 984 aaKnown RBP26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 CLASRPQ8N2M8 674 aaKnown RBP26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 ANTXR1Q9H6X2 564 aa26.19■■□□□ 1.78
PPP4R1-228ENST00000584074 MAST2Q6P0Q8 1798 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 FAM196BA6NMK8 535 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 RAB11FIP3O75154 756 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 SCYL3Q8IZE3 742 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 ZFYVE28Q9HCC9 887 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 KCNH4Q9UQ05 1017 aa26.18■■□□□ 1.78
PPP4R1-228ENST00000584074 IGSF3O75054 1194 aa26.17■■□□□ 1.78
PPP4R1-228ENST00000584074 PLCG2P16885 1265 aa26.17■■□□□ 1.78
PPP4R1-228ENST00000584074 CYP7A1P22680 504 aa26.17■■□□□ 1.78
PPP4R1-228ENST00000584074 PICK1Q9NRD5 415 aa26.17■■□□□ 1.78
PPP4R1-228ENST00000584074 HPS5Q9UPZ3 1129 aa26.17■■□□□ 1.78
PPP4R1-228ENST00000584074 TBC1D12O60347 775 aa26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 IFIT2P09913 472 aaKnown RBP26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 SP3Q02447 781 aa26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 CD99L2Q8TCZ2 262 aa26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 TGFBRAP1Q8WUH2 860 aa26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 ZHX2Q9Y6X8 837 aa26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 COL2A1P02458 1487 aaPredicted RBP26.16■■□□□ 1.78
PPP4R1-228ENST00000584074 CTNND1O60716 968 aaKnown RBP26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 PTPRAP18433 802 aa26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 DYNLL1P63167 89 aaKnown RBP26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 MOGSQ13724 837 aa26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 MAPKAPK5Q8IW41 473 aa26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 MAGEB6Q8N7X4 407 aa26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.15■■□□□ 1.786e-7■■■□□ 18.3
PPP4R1-228ENST00000584074 ZCCHC17Q9NP64 241 aaKnown RBP26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 TRIM17Q9Y577 477 aa26.15■■□□□ 1.78
PPP4R1-228ENST00000584074 FBXO46Q6PJ61 603 aaPredicted RBP26.14■■□□□ 1.78
PPP4R1-228ENST00000584074 OTOP1Q7RTM1 612 aa26.14■■□□□ 1.78
PPP4R1-228ENST00000584074 ERO1AQ96HE7 468 aa26.14■■□□□ 1.78
PPP4R1-228ENST00000584074 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.14■■□□□ 1.78
PPP4R1-228ENST00000584074 MYO5AQ9Y4I1 1855 aaKnown RBP26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 CAP1Q01518 475 aa26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 MAP3K12Q12852 859 aa26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 MIGA1Q8NAN2 632 aa26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 FLT1P17948 1338 aa26.13■■□□□ 1.77
PPP4R1-228ENST00000584074 HTTP42858 3142 aa26.12■■□□□ 1.77
PPP4R1-228ENST00000584074 CXCL11O14625 94 aa26.12■■□□□ 1.77
PPP4R1-228ENST00000584074 ANKRD23Q86SG2 305 aa26.12■■□□□ 1.77
PPP4R1-228ENST00000584074 PDHXO00330 501 aa26.11■■□□□ 1.77
PPP4R1-228ENST00000584074 TLR2O60603 784 aa26.11■■□□□ 1.77
PPP4R1-228ENST00000584074 CCDC84Q86UT8 332 aaPredicted RBP26.11■■□□□ 1.77
PPP4R1-228ENST00000584074 DHX36Q9H2U1 1008 aaKnown RBP26.11■■□□□ 1.77
PPP4R1-228ENST00000584074 AFG3L2Q9Y4W6 797 aa26.11■■□□□ 1.77
PPP4R1-228ENST00000584074 RRP1BQ14684 758 aaKnown RBP26.1■■□□□ 1.77
PPP4R1-228ENST00000584074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms