RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 VEZTQ9HBM0 779 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
CDRT1-207ENST00000583965 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
CDRT1-207ENST00000583965 MKRN1Q9UHC7 482 aaKnown RBP13.93□□□□□ -0.18
CDRT1-207ENST00000583965 FOXP2O15409 715 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 TDO2P48775 406 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 NFIAQ12857 509 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 EAPPQ56P03 285 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 VPS53Q5VIR6 699 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 ANGEL2Q5VTE6 544 aaKnown RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 FAM151AQ8WW52 585 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 MAP4K1Q92918 833 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 DCPSQ96C86 337 aaKnown RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 OSBPL5Q9H0X9 879 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 NAPBQ9H115 298 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 DHX36Q9H2U1 1008 aaKnown RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 NMRK2Q9NPI5 230 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 GGA3Q9NZ52 723 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 PPP2R3BQ9Y5P8 575 aa13.92□□□□□ -0.18
CDRT1-207ENST00000583965 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-207ENST00000583965 TCP10L2B9ZVM9 353 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 CACNB3P54284 484 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 PTH1RQ03431 593 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 PICALMQ13492 652 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 LDHDQ86WU2 507 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 MAPKAPK5Q8IW41 473 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 EPB41L4AQ9HCS5 686 aaPredicted RBP13.91□□□□□ -0.18
CDRT1-207ENST00000583965 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
CDRT1-207ENST00000583965 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 ATRNL1Q5VV63 1379 aa13.91□□□□□ -0.18
CDRT1-207ENST00000583965 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.18
CDRT1-207ENST00000583965 ATAD5Q96QE3 1844 aa13.9□□□□□ -0.18
CDRT1-207ENST00000583965 FGAP02671 866 aa13.9□□□□□ -0.18
CDRT1-207ENST00000583965 YY1P25490 414 aa13.9□□□□□ -0.18
CDRT1-207ENST00000583965 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
CDRT1-207ENST00000583965 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
CDRT1-207ENST00000583965 POLR3DP05423 398 aaPredicted RBP13.89□□□□□ -0.19
CDRT1-207ENST00000583965 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 TCP10Q12799 353 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 RASA3Q14644 834 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 SULF1Q8IWU6 871 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 DEFB129Q9H1M3 183 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
CDRT1-207ENST00000583965 RBM8AQ9Y5S9 174 aaKnown RBP13.89□□□□□ -0.19
CDRT1-207ENST00000583965 USP17L12C9JPN9 530 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 USP17L21D6R901 530 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 IMMTQ16891 758 aaKnown RBP13.88□□□□□ -0.19
CDRT1-207ENST00000583965 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 KRT26Q7Z3Y9 468 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-207ENST00000583965 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
CDRT1-207ENST00000583965 PI4KBQ9UBF8 816 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
CDRT1-207ENST00000583965 ANAPC4Q9UJX5 808 aa13.88□□□□□ -0.19
CDRT1-207ENST00000583965 ROBO3Q96MS0 1386 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 ZNF213O14771 459 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 SEC24BO95487 1268 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 SLC3A2P08195 630 aaKnown RBP13.87□□□□□ -0.19
CDRT1-207ENST00000583965 MCCP23508 829 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 ZFPM1Q8IX07 1006 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 TMEM39BQ9GZU3 492 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 EHD4Q9H223 541 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 PALD1Q9ULE6 856 aa13.87□□□□□ -0.19
CDRT1-207ENST00000583965 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-207ENST00000583965 MINDY4BA8MYZ0 360 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 PCP11498 1178 aaKnown RBP13.86□□□□□ -0.19
CDRT1-207ENST00000583965 PPARAQ07869 468 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 SUPT20HL1Q3ZLR7 823 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
CDRT1-207ENST00000583965 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-207ENST00000583965 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 CSRNP1Q96S65 589 aa13.86□□□□□ -0.19
CDRT1-207ENST00000583965 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
CDRT1-207ENST00000583965 DOCK1Q14185 1865 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 KIF3CO14782 793 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 TBC1D12O60347 775 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 HSPA4P34932 840 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 PLCD1P51178 756 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms