RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CNNM1Q9NRU3 951 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
SMCHD1-210ENST00000583800 FAM205AQ6ZU69 1335 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 GRM8O00222 908 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 GYG1P46976 350 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 CENPFP49454 3210 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 INHBEP58166 350 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 CRHR2Q13324 411 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 MFSD14BQ5SR56 506 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 ANKRD13AQ8IZ07 590 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 PUS3Q9BZE2 481 aaKnown RBP9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 TDRD3Q9H7E2 651 aaKnown RBP9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 ELP3Q9H9T3 547 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 MRS2Q9HD23 443 aa9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 ZNF70Q9UC06 446 aaPredicted RBP9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 TTF2Q9UNY4 1162 aaKnown RBP9.86□□□□□ -0.83
SMCHD1-210ENST00000583800 UNCXA6NJT0 531 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 PPP1R3GB7ZBB8 358 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 CAP1Q01518 475 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 TDRD7Q8NHU6 1098 aaKnown RBP9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 OPTNQ96CV9 577 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 ERO1AQ96HE7 468 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 SUCLG2Q96I99 432 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 PTPN18Q99952 460 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 C9orf78Q9NZ63 289 aaPredicted RBP9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 PTPN22Q9Y2R2 807 aa9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 MKI67P46013 3256 aaKnown RBP9.85□□□□□ -0.83
SMCHD1-210ENST00000583800 AK9Q5TCS8 1911 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 TCP10L2B9ZVM9 353 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 DPYSL4O14531 572 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 GPR37O15354 613 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 TRAK2O60296 914 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 HIBADHP31937 336 aaKnown RBP9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 CRKP46108 304 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 BCAMP50895 628 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 TNFAIP1Q13829 316 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 UBE4AQ14139 1066 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 GRIK5Q16478 980 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 PROX2Q3B8N5 592 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 OTUD7BQ6GQQ9 843 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 KAZALD1Q96I82 304 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 FAM84BQ96KN1 310 aaPredicted RBP9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 TEPSINQ96N21 525 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 TMEM39BQ9GZU3 492 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 SERPINA10Q9UK55 444 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 BRCA2P51587 3418 aa9.84□□□□□ -0.83
SMCHD1-210ENST00000583800 ALDH1L1O75891 902 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 SP3Q02447 781 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 CHAF1AQ13111 956 aaPredicted RBP9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 VGLL4Q14135 290 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 SRCIN1Q9C0H9 1055 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
SMCHD1-210ENST00000583800 CCL15-CCL14A0A0B4J2E2 113 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 NBPF7P0C2Y1 421 aaPredicted RBP9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 CACNB3P54284 484 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 TAF1CQ15572 869 aaPredicted RBP9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 CCL15Q16663 113 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 BRI3BPQ8WY22 251 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
SMCHD1-210ENST00000583800 EN2P19622 333 aaPredicted RBP9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 COL9A1P20849 921 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 TNNI2P48788 182 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 LRRC24Q50LG9 513 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 NYAP1Q6ZVC0 841 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 LAPTM4BQ86VI4 370 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 VPS37DQ86XT2 251 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 FAM43AQ8N2R8 423 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 ARMC5Q96C12 935 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 BICC1Q9H694 974 aaKnown RBP9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 RIPOR2Q9Y4F9 1068 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 PCDHGA10Q9Y5H3 936 aa9.81□□□□□ -0.84
SMCHD1-210ENST00000583800 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 GTF2A2P52657 109 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 KCNC4Q03721 635 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 AMHR2Q16671 573 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 RABL6Q3YEC7 729 aaPredicted RBP9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 METTL24Q5JXM2 366 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 KLHDC4Q8TBB5 520 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 GCC1Q96CN9 775 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 ZFYVE28Q9HCC9 887 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 CSADQ9Y600 493 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 PTCH2Q9Y6C5 1203 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 SNCAIPQ9Y6H5 919 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 UTYO14607 1347 aa9.8□□□□□ -0.84
SMCHD1-210ENST00000583800 DOCK2Q92608 1830 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 MGAMO43451 1857 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms