RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
IFT20-213ENST00000583796 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
IFT20-213ENST00000583796 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
IFT20-213ENST00000583796 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
IFT20-213ENST00000583796 GABBR2O75899 941 aa12□□□□□ -0.49
IFT20-213ENST00000583796 CDKL5O76039 1030 aa12□□□□□ -0.49
IFT20-213ENST00000583796 APOBRQ0VD83 1088 aa12□□□□□ -0.49
IFT20-213ENST00000583796 PPP2R5BQ15173 497 aa12□□□□□ -0.49
IFT20-213ENST00000583796 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
IFT20-213ENST00000583796 KLHL34Q8N239 644 aa12□□□□□ -0.49
IFT20-213ENST00000583796 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
IFT20-213ENST00000583796 NSUN7Q8NE18 718 aaKnown RBP12□□□□□ -0.49
IFT20-213ENST00000583796 ESR2Q92731 530 aa12□□□□□ -0.49
IFT20-213ENST00000583796 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
IFT20-213ENST00000583796 POLLQ9UGP5 575 aa12□□□□□ -0.49
IFT20-213ENST00000583796 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 NEDD4P46934 1319 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 ERICH2A1L162 156 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 PRKAB2O43741 272 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 STK3Q13188 491 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 DPP8Q6V1X1 898 aaPredicted RBP11.99□□□□□ -0.49
IFT20-213ENST00000583796 LRRC2Q9BYS8 371 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
IFT20-213ENST00000583796 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
IFT20-213ENST00000583796 ROBO3Q96MS0 1386 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 B4E1Z4 1266 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 AMOTL1Q8IY63 956 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 SDR42E1Q8WUS8 393 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
IFT20-213ENST00000583796 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
IFT20-213ENST00000583796 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 AATFQ9NY61 560 aaKnown RBP eCLIP11.98□□□□□ -0.49
IFT20-213ENST00000583796 GAKO14976 1311 aa11.98□□□□□ -0.49
IFT20-213ENST00000583796 CPLX1O14810 134 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 ORC4O43929 436 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 KDM4AO75164 1064 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 FKBP1AP62942 108 aaKnown RBP11.97□□□□□ -0.49
IFT20-213ENST00000583796 MFSD14BQ5SR56 506 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 PODNQ7Z5L7 613 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
IFT20-213ENST00000583796 ZSWIM5Q9P217 1185 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
IFT20-213ENST00000583796 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
IFT20-213ENST00000583796 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 VPS37CA5D8V6 355 aaPredicted RBP11.96□□□□□ -0.49
IFT20-213ENST00000583796 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
IFT20-213ENST00000583796 DYNLL1P63167 89 aaKnown RBP11.96□□□□□ -0.49
IFT20-213ENST00000583796 CTDSPL2Q05D32 466 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 PDE4BQ07343 736 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 TMEM67Q5HYA8 995 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 MSL1Q68DK7 614 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 IQCA1Q86XH1 822 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 UBAC1Q9BSL1 405 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 LY9Q9HBG7 655 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
IFT20-213ENST00000583796 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 ELP1O95163 1332 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 STK36Q9NRP7 1315 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 DDX60LQ5H9U9 1706 aaKnown RBP11.96□□□□□ -0.49
IFT20-213ENST00000583796 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
IFT20-213ENST00000583796 KIF13BQ9NQT8 1826 aa11.96□□□□□ -0.5
IFT20-213ENST00000583796 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 H3BQV1 296 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 IFIT3O14879 490 aaKnown RBP11.95□□□□□ -0.5
IFT20-213ENST00000583796 ZBTB43O43298 467 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 JAK2O60674 1132 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 CTDNEP1O95476 244 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
IFT20-213ENST00000583796 KRT85P78386 507 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 WTAPQ15007 396 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 CCDC178Q5BJE1 867 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 SYAP1Q96A49 352 aaPredicted RBP11.95□□□□□ -0.5
IFT20-213ENST00000583796 SCAND2PQ9GZW5 306 aaPredicted RBP11.95□□□□□ -0.5
IFT20-213ENST00000583796 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
IFT20-213ENST00000583796 SLC12A7Q9Y666 1083 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 BAZ2AQ9UIF9 1905 aaKnown RBP11.95□□□□□ -0.5
IFT20-213ENST00000583796 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 MINDY4BA8MYZ0 360 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 USP17L21D6R901 530 aa11.95□□□□□ -0.5
IFT20-213ENST00000583796 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms