RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TTC39AQ5SRH9 613 aa14.35□□□□□ -0.11
GGA3-217ENST00000583667 KCNB2Q92953 911 aa14.35□□□□□ -0.11
GGA3-217ENST00000583667 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
GGA3-217ENST00000583667 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
GGA3-217ENST00000583667 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 ZFYP08048 801 aaPredicted RBP14.34□□□□□ -0.11
GGA3-217ENST00000583667 MCCP23508 829 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 RABEP1Q15276 862 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 CCDC102BQ68D86 513 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 PODXL2Q9NZ53 605 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 ARAP2Q8WZ64 1704 aa14.34□□□□□ -0.11
GGA3-217ENST00000583667 IGSF3O75054 1194 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 HSPA4P34932 840 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 GJA8P48165 433 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.12
GGA3-217ENST00000583667 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
GGA3-217ENST00000583667 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
GGA3-217ENST00000583667 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 NKX2-3Q8TAU0 364 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 IL25Q9H293 177 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 ZNF804BA4D1E1 1349 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 MED23Q9ULK4 1368 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 COL4A1P02462 1669 aa14.33□□□□□ -0.12
GGA3-217ENST00000583667 GOLIM4O00461 696 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 UFL1O94874 794 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 COL9A1P20849 921 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 C15orf52Q6ZUT6 534 aaKnown RBP14.32□□□□□ -0.12
GGA3-217ENST00000583667 HELBQ8NG08 1087 aaPredicted RBP14.32□□□□□ -0.12
GGA3-217ENST00000583667 MAP4K1Q92918 833 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 DNAJC2Q99543 621 aaKnown RBP14.32□□□□□ -0.12
GGA3-217ENST00000583667 MXD3Q9BW11 206 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 ARHGAP39Q9C0H5 1083 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 ANO2Q9NQ90 1003 aa14.32□□□□□ -0.12
GGA3-217ENST00000583667 UNCXA6NJT0 531 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 SEMA3EO15041 775 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
GGA3-217ENST00000583667 EVI5O60447 810 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 TAF5LO75529 589 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 BMP8BP34820 402 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 MCAMP43121 646 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 MCMDC2Q4G0Z9 681 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 ZMYM1Q5SVZ6 1142 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 APOBEC3FQ8IUX4 373 aaKnown RBP14.31□□□□□ -0.12
GGA3-217ENST00000583667 OGFOD1Q8N543 542 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 EDC3Q96F86 508 aaKnown RBP14.31□□□□□ -0.12
GGA3-217ENST00000583667 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 LEMD3Q9Y2U8 911 aa14.31□□□□□ -0.12
GGA3-217ENST00000583667 PDS5AQ29RF7 1337 aaKnown RBP14.31□□□□□ -0.12
GGA3-217ENST00000583667 LAMB1P07942 1786 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
GGA3-217ENST00000583667 GJB1P08034 283 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 ZAP70P43403 619 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 PHKA1P46020 1223 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 NECTIN1Q15223 517 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 MS4A4AQ96JQ5 239 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 GDF15Q99988 308 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 DEFB129Q9H1M3 183 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 GGA1Q9UJY5 639 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
GGA3-217ENST00000583667 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 LRIT3Q3SXY7 679 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 TSGA10IPQ3SY00 556 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 DACT2Q5SW24 774 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
GGA3-217ENST00000583667 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
GGA3-217ENST00000583667 HMG20BQ9P0W2 317 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
GGA3-217ENST00000583667 IRS2Q9Y4H2 1338 aa14.29□□□□□ -0.12
GGA3-217ENST00000583667 ZNF646O15015 1829 aaPredicted RBP14.29□□□□□ -0.12
GGA3-217ENST00000583667 CYP2E1P05181 493 aaPredicted RBP14.28□□□□□ -0.12
GGA3-217ENST00000583667 CCL5P13501 91 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 BCAMP50895 628 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 UBE3CQ15386 1083 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 TAF1CQ15572 869 aaPredicted RBP14.28□□□□□ -0.12
GGA3-217ENST00000583667 CAVIN4Q5BKX8 364 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 SPATA5Q8NB90 893 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
GGA3-217ENST00000583667 TM6SF1Q9BZW5 370 aa14.28□□□□□ -0.12
GGA3-217ENST00000583667 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.121e-9■□□□□ 10.5
GGA3-217ENST00000583667 PSME4Q14997 1843 aa14.27□□□□□ -0.12
GGA3-217ENST00000583667 A0A1B0GUL6 1792 aa14.27□□□□□ -0.12
GGA3-217ENST00000583667 SSC5DA1L4H1 1573 aa14.27□□□□□ -0.12
GGA3-217ENST00000583667 XDHP47989 1333 aa14.27□□□□□ -0.12
GGA3-217ENST00000583667 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
GGA3-217ENST00000583667 GNRH1P01148 92 aa14.27□□□□□ -0.13
GGA3-217ENST00000583667 PRMT2P55345 433 aa14.27□□□□□ -0.13
GGA3-217ENST00000583667 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
GGA3-217ENST00000583667 PTH1RQ03431 593 aa14.27□□□□□ -0.13
GGA3-217ENST00000583667 KIF22Q14807 665 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms