RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CRNKL1Q9BZJ0 848 aaKnown RBP19.55■□□□□ 0.72
CDK5RAP3-228ENST00000583363 MYOZ2Q9NPC6 264 aa19.55■□□□□ 0.72
CDK5RAP3-228ENST00000583363 GPRC5DQ9NZD1 345 aa19.55■□□□□ 0.72
CDK5RAP3-228ENST00000583363 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 FGAP02671 866 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 APPP05067 770 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 IFNL3Q8IZI9 196 aa19.54■□□□□ 0.72
CDK5RAP3-228ENST00000583363 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 NECTIN1Q15223 517 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 GIMAP6Q6P9H5 292 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 TEX11Q8IYF3 940 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 UPF2Q9HAU5 1272 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 RBM8AQ9Y5S9 174 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-228ENST00000583363 TRAF5O00463 557 aa19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 RBM26Q5T8P6 1007 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 CST9Q5W186 159 aa19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 USP50Q70EL3 339 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 C22orf23Q9BZE7 217 aa19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 NACAP1Q9BZK3 213 aa19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 TDRD3Q9H7E2 651 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 EPB41L4AQ9HCS5 686 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-228ENST00000583363 WNT10BO00744 389 aa19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 HSPA4P34932 840 aa19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 USP5P45974 858 aa19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 DCP1AQ9NPI6 582 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CTNNA3Q9UI47 895 aa19.51■□□□□ 0.71
CDK5RAP3-228ENST00000583363 EGFRP00533 1210 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CYP4F22Q6NT55 531 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 KCNB2Q92953 911 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ZMYM6O95789 1325 aa19.5■□□□□ 0.71
CDK5RAP3-228ENST00000583363 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 SPDYE2Q495Y8 402 aa19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CREB3L3Q68CJ9 461 aa19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 MAPKAPK5Q8IW41 473 aa19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TBC1D32Q96NH3 1257 aa19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 NAPBQ9H115 298 aa19.49■□□□□ 0.71
CDK5RAP3-228ENST00000583363 SLC27A2O14975 620 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 MCCP23508 829 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TDO2P48775 406 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 GRM1Q13255 1194 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 KIF4BQ2VIQ3 1234 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ABHD8Q96I13 439 aa19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ADARB2Q9NS39 739 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-228ENST00000583363 USP17L12C9JPN9 530 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 USP17L21D6R901 530 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 MYO1BO43795 1136 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ECE1P42892 770 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 HIRAP54198 1017 aaPredicted RBP19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 NFIAQ12857 509 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TSGA10IPQ3SY00 556 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 SBK1Q52WX2 424 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 FKBP1CQ5VVH2 108 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TRPM4Q8TD43 1214 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 FAM198AQ9UFP1 575 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TLL2Q9Y6L7 1015 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 FLT1P17948 1338 aa19.47■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CLRN2A0PK11 232 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ZNF213O14771 459 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CYP21A2P08686 494 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 CACNB3P54284 484 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 IMMTQ16891 758 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 RNF20Q5VTR2 975 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 TMOD2Q9NZR1 351 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
CDK5RAP3-228ENST00000583363 ENTPD3O75355 529 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ANAPC15P60006 121 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 PICALMQ13492 652 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ZFPM1Q8IX07 1006 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 IL17RAQ96F46 866 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 OSBPL5Q9H0X9 879 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 SNX14Q9Y5W7 946 aa19.45■□□□□ 0.7
CDK5RAP3-228ENST00000583363 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 AOC2O75106 756 aa19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ZKSCAN1P17029 563 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 HAND2P61296 217 aa19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 C12orf60Q5U649 245 aa19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ARPP21Q9UBL0 812 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 SAP30BPQ9UHR5 308 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ANAPC4Q9UJX5 808 aa19.44■□□□□ 0.7
CDK5RAP3-228ENST00000583363 CYP2D7A0A087X1C5 515 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms