RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 H7C1W4 665 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 ADKP55263 362 aaKnown RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 PDE4BQ07343 736 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 CCDC158Q5M9N0 1113 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 CTDSPL2Q05D32 466 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 TOM1L2Q6ZVM7 507 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 IRX2Q9BZI1 471 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 A0A0U1RQJ8 604 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 GUCY1A2P33402 732 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 LONRF3Q496Y0 759 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 KRT40Q6A162 431 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 SRCAPQ6ZRS2 3230 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 MCAMP43121 646 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 HSPA2P54652 639 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 KLHL10Q6JEL2 608 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-214ENST00000582981 SLC26A6Q9BXS9 759 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
TOP3A-214ENST00000582981 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.48
TOP3A-214ENST00000582981 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.48
TOP3A-214ENST00000582981 NCOA7Q8NI08 942 aa12.02□□□□□ -0.48
TOP3A-214ENST00000582981 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.48
TOP3A-214ENST00000582981 HSD3B7Q9H2F3 369 aa12.02□□□□□ -0.48
TOP3A-214ENST00000582981 CAVIN2O95810 425 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 TPM1P09493 284 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 MNAT1P51948 309 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 STX17P56962 302 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 LONRF2Q1L5Z9 754 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 DNAJC21Q5F1R6 531 aaKnown RBP12.02□□□□□ -0.49
TOP3A-214ENST00000582981 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 KCNG4Q8TDN1 519 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 STAMQ92783 540 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 CCDC102AQ96A19 550 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
TOP3A-214ENST00000582981 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
TOP3A-214ENST00000582981 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
TOP3A-214ENST00000582981 NLRP12P59046 1061 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 USP49Q70CQ1 688 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 FUT8Q9BYC5 575 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 PCDHA5Q9Y5H7 936 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 GNG11P61952 73 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 TRDNQ13061 729 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 MTF1Q14872 753 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-214ENST00000582981 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 NR5A1Q13285 461 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 LDHAL6AQ6ZMR3 332 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 CCDC150Q8NCX0 1101 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 GREM2Q9H772 168 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
TOP3A-214ENST00000582981 CNNM1Q9NRU3 951 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
TOP3A-214ENST00000582981 ATP8B1O43520 1251 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 RANBP6O60518 1105 aaKnown RBP12□□□□□ -0.49
TOP3A-214ENST00000582981 BMP6P22004 513 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 MAP2K2P36507 400 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 PHKA1P46020 1223 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 PPP2R3AQ06190 1150 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
TOP3A-214ENST00000582981 ANKRD20A12PQ8NF67 263 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 WDR24Q96S15 920 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 FAM205CA6NFA0 338 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 PRKAB2O43741 272 aa12□□□□□ -0.49
TOP3A-214ENST00000582981 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
TOP3A-214ENST00000582981 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
TOP3A-214ENST00000582981 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
TOP3A-214ENST00000582981 ZNF622Q969S3 477 aaKnown RBP eCLIP12□□□□□ -0.49
TOP3A-214ENST00000582981 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms