RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.65
NUP85-217ENST00000581335 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
NUP85-217ENST00000581335 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
NUP85-217ENST00000581335 TRIM17Q9Y577 477 aa10.96□□□□□ -0.65
NUP85-217ENST00000581335 MAST3O60307 1309 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 SLC5A1P13866 664 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 CACNB3P54284 484 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 CRHR2Q13324 411 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 VGLL4Q14135 290 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUP85-217ENST00000581335 LPIN2Q92539 896 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 ERO1AQ96HE7 468 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
NUP85-217ENST00000581335 TBC1D12O60347 775 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 GTF2A2P52657 109 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 SP3Q02447 781 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 APOBEC3HQ6NTF7 200 aaKnown RBP10.94□□□□□ -0.66
NUP85-217ENST00000581335 HHIPL2Q6UWX4 724 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 ATG9AQ7Z3C6 839 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 CD99L2Q8TCZ2 262 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 TMOD2Q9NZR1 351 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 PTPN22Q9Y2R2 807 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 CSADQ9Y600 493 aa10.94□□□□□ -0.66
NUP85-217ENST00000581335 CT47B1P0C2W7 299 aaPredicted RBP10.93□□□□□ -0.66
NUP85-217ENST00000581335 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
NUP85-217ENST00000581335 BRI3BPQ8WY22 251 aa10.93□□□□□ -0.66
NUP85-217ENST00000581335 HOOK2Q96ED9 719 aa10.93□□□□□ -0.66
NUP85-217ENST00000581335 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
NUP85-217ENST00000581335 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
NUP85-217ENST00000581335 CCL15-CCL14A0A0B4J2E2 113 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 SPDYE5A6NIY4 337 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 CIAO1O76071 339 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
NUP85-217ENST00000581335 CCL15Q16663 113 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 ERO1BQ86YB8 467 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 OTUD5Q96G74 571 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 WRNIP1Q96S55 665 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 SIL1Q9H173 461 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 EFCC1Q9HA90 598 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
NUP85-217ENST00000581335 CEP126Q9P2H0 1117 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 HDAC5Q9UQL6 1122 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
NUP85-217ENST00000581335 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 CAP1Q01518 475 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 TAF1CQ15572 869 aaPredicted RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 ATP2B3Q16720 1220 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 DCAF15Q66K64 600 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 FAM151AQ8WW52 585 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 ZKSCAN4Q969J2 545 aaPredicted RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 TMUB1Q9BVT8 246 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 REPIN1Q9BWE0 567 aaKnown RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 API5Q9BZZ5 524 aaKnown RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 GNL3LQ9NVN8 582 aaKnown RBP10.91□□□□□ -0.66
NUP85-217ENST00000581335 SNCAIPQ9Y6H5 919 aa10.91□□□□□ -0.66
NUP85-217ENST00000581335 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
NUP85-217ENST00000581335 CETPP11597 493 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
NUP85-217ENST00000581335 PPIL2Q13356 520 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 ARHGEF6Q15052 776 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
NUP85-217ENST00000581335 DENND2AQ9ULE3 1009 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 DAGLAQ9Y4D2 1042 aa10.9□□□□□ -0.66
NUP85-217ENST00000581335 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
NUP85-217ENST00000581335 SALL1Q9NSC2 1324 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
NUP85-217ENST00000581335 GABBR2O75899 941 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 LDHBP07195 334 aaKnown RBP10.89□□□□□ -0.67
NUP85-217ENST00000581335 MS4A1P11836 297 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 PRDX5P30044 214 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 PPATQ06203 517 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 TCP10Q12799 353 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 DIXDC1Q155Q3 683 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 ARMC5Q96C12 935 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 COPRSQ9NQ92 184 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 PA2G4Q9UQ80 394 aaKnown RBP10.89□□□□□ -0.67
NUP85-217ENST00000581335 MYH2Q9UKX2 1941 aa10.89□□□□□ -0.67
NUP85-217ENST00000581335 BTBD19C9JJ37 291 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 TLR2O60603 784 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 INPP5BP32019 993 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 PHKA1P46020 1223 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 RARSP54136 660 aaKnown RBP10.88□□□□□ -0.67
NUP85-217ENST00000581335 ARHGAP45Q92619 1136 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 MEIS3Q99687 375 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 USP40Q9NVE5 1235 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 FAM198AQ9UFP1 575 aa10.88□□□□□ -0.67
NUP85-217ENST00000581335 HTTP42858 3142 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms