RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
IFT20-211ENST00000580991 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.47■□□□□ 0.55
IFT20-211ENST00000580991 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
IFT20-211ENST00000580991 DAGLAQ9Y4D2 1042 aa18.47■□□□□ 0.55
IFT20-211ENST00000580991 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
IFT20-211ENST00000580991 GADL1Q6ZQY3 521 aa18.46■□□□□ 0.55
IFT20-211ENST00000580991 SCYL3Q8IZE3 742 aa18.46■□□□□ 0.55
IFT20-211ENST00000580991 TDHQ8IZJ6 230 aa18.46■□□□□ 0.55
IFT20-211ENST00000580991 FAM198AQ9UFP1 575 aa18.46■□□□□ 0.55
IFT20-211ENST00000580991 AFG3L2Q9Y4W6 797 aa18.46■□□□□ 0.55
IFT20-211ENST00000580991 IFIT1P09914 478 aaKnown RBP18.45■□□□□ 0.54
IFT20-211ENST00000580991 PTPRAP18433 802 aa18.45■□□□□ 0.54
IFT20-211ENST00000580991 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
IFT20-211ENST00000580991 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
IFT20-211ENST00000580991 PTPRFP10586 1907 aa18.45■□□□□ 0.54
IFT20-211ENST00000580991 MYH13Q9UKX3 1938 aa18.45■□□□□ 0.54
IFT20-211ENST00000580991 PHF20L1A8MW92 1017 aa18.44■□□□□ 0.54
IFT20-211ENST00000580991 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 MAGEA10P43363 369 aaPredicted RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 PUM3Q15397 648 aaKnown RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
IFT20-211ENST00000580991 RABL6Q3YEC7 729 aaPredicted RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 COL25A1Q9BXS0 654 aaPredicted RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 BICC1Q9H694 974 aaKnown RBP18.44■□□□□ 0.54
IFT20-211ENST00000580991 HMGCRP04035 888 aa18.43■□□□□ 0.54
IFT20-211ENST00000580991 ANKRD13CQ8N6S4 541 aa18.43■□□□□ 0.54
IFT20-211ENST00000580991 USP40Q9NVE5 1235 aa18.43■□□□□ 0.54
IFT20-211ENST00000580991 UTYO14607 1347 aa18.43■□□□□ 0.54
IFT20-211ENST00000580991 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 SYN1P17600 705 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 FGFR2P21802 821 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 AGTPBP1Q9UPW5 1226 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 DOCK2Q92608 1830 aa18.42■□□□□ 0.54
IFT20-211ENST00000580991 VCANP13611 3396 aa18.41■□□□□ 0.54
IFT20-211ENST00000580991 UBE2OQ9C0C9 1292 aaKnown RBP18.41■□□□□ 0.54
IFT20-211ENST00000580991 C11orf49Q9H6J7 331 aa18.41■□□□□ 0.54
IFT20-211ENST00000580991 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
IFT20-211ENST00000580991 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
IFT20-211ENST00000580991 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
IFT20-211ENST00000580991 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
IFT20-211ENST00000580991 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
IFT20-211ENST00000580991 CTNND1O60716 968 aaKnown RBP18.4■□□□□ 0.54
IFT20-211ENST00000580991 ENTPD3O75355 529 aa18.4■□□□□ 0.54
IFT20-211ENST00000580991 LDHBP07195 334 aaKnown RBP18.4■□□□□ 0.54
IFT20-211ENST00000580991 PRDX5P30044 214 aa18.4■□□□□ 0.54
IFT20-211ENST00000580991 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
IFT20-211ENST00000580991 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
IFT20-211ENST00000580991 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.4■□□□□ 0.54
IFT20-211ENST00000580991 ANKRD44Q8N8A2 993 aa18.4■□□□□ 0.54
IFT20-211ENST00000580991 SLC5A1P13866 664 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 LPIN2Q92539 896 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
IFT20-211ENST00000580991 PHIPQ8WWQ0 1821 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 DOCK1Q14185 1865 aa18.39■□□□□ 0.53
IFT20-211ENST00000580991 GCLCP48506 637 aaPredicted RBP18.38■□□□□ 0.53
IFT20-211ENST00000580991 RGS3P49796 1198 aa18.38■□□□□ 0.53
IFT20-211ENST00000580991 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
IFT20-211ENST00000580991 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
IFT20-211ENST00000580991 OGDHLQ9ULD0 1010 aa18.38■□□□□ 0.53
IFT20-211ENST00000580991 TTC28Q96AY4 2481 aa18.37■□□□□ 0.53
IFT20-211ENST00000580991 TREML2Q5T2D2 321 aa18.37■□□□□ 0.53
IFT20-211ENST00000580991 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
IFT20-211ENST00000580991 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
IFT20-211ENST00000580991 SH3BP5LQ7L8J4 393 aa18.36■□□□□ 0.53
IFT20-211ENST00000580991 SALL1Q9NSC2 1324 aa18.36■□□□□ 0.53
IFT20-211ENST00000580991 GNL3LQ9NVN8 582 aaKnown RBP18.36■□□□□ 0.53
IFT20-211ENST00000580991 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
IFT20-211ENST00000580991 TRIM32Q13049 653 aa18.35■□□□□ 0.53
IFT20-211ENST00000580991 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
IFT20-211ENST00000580991 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
IFT20-211ENST00000580991 RFX7Q2KHR2 1363 aa18.34■□□□□ 0.53
IFT20-211ENST00000580991 PFASO15067 1338 aa18.34■□□□□ 0.53
IFT20-211ENST00000580991 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
IFT20-211ENST00000580991 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
IFT20-211ENST00000580991 EYA2O00167 538 aa18.34■□□□□ 0.53
IFT20-211ENST00000580991 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
IFT20-211ENST00000580991 GAKO14976 1311 aa18.33■□□□□ 0.53
IFT20-211ENST00000580991 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
IFT20-211ENST00000580991 CCDC84Q86UT8 332 aaPredicted RBP18.33■□□□□ 0.52
IFT20-211ENST00000580991 TRIB2Q92519 343 aa18.33■□□□□ 0.52
IFT20-211ENST00000580991 DENND2AQ9ULE3 1009 aa18.33■□□□□ 0.52
IFT20-211ENST00000580991 SEMA3EO15041 775 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
IFT20-211ENST00000580991 SPP2Q13103 211 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 ZGPATQ8N5A5 531 aaKnown RBP18.32■□□□□ 0.52
IFT20-211ENST00000580991 GUCD1Q96NT3 240 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
IFT20-211ENST00000580991 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
IFT20-211ENST00000580991 DNAH12Q6ZR08 3092 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
IFT20-211ENST00000580991 SPTBN5Q9NRC6 3674 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms