RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
TOP3A-210ENST00000580713 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
TOP3A-210ENST00000580713 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
TOP3A-210ENST00000580713 GPAT2Q6NUI2 795 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 GADL1Q6ZQY3 521 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 PUS3Q9BZE2 481 aaKnown RBP13.52□□□□□ -0.25
TOP3A-210ENST00000580713 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-210ENST00000580713 MAST3O60307 1309 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 A0A1B0GUL6 1792 aa13.52□□□□□ -0.25
TOP3A-210ENST00000580713 LAMA3Q16787 3333 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 CXCL11O14625 94 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 IRF5Q13568 498 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 FASTKD5Q7L8L6 764 aaKnown RBP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 FBXO33Q7Z6M2 555 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 FAM151AQ8WW52 585 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 COA7Q96BR5 231 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.51□□□□□ -0.25
TOP3A-210ENST00000580713 ZNF112Q9UJU3 913 aa13.51□□□□□ -0.25
TOP3A-210ENST00000580713 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-210ENST00000580713 F6X3S4 739 aa13.5□□□□□ -0.25
TOP3A-210ENST00000580713 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
TOP3A-210ENST00000580713 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
TOP3A-210ENST00000580713 C9orf78Q9NZ63 289 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-210ENST00000580713 GRM8O00222 908 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 METTL24Q5JXM2 366 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 BEND3Q5T5X7 828 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 ANKLE1Q8NAG6 615 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 ZHX2Q9Y6X8 837 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
TOP3A-210ENST00000580713 MGAMO43451 1857 aa13.48□□□□□ -0.25
TOP3A-210ENST00000580713 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
TOP3A-210ENST00000580713 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
TOP3A-210ENST00000580713 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
TOP3A-210ENST00000580713 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-210ENST00000580713 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-210ENST00000580713 ANKRD13CQ8N6S4 541 aa13.47□□□□□ -0.25
TOP3A-210ENST00000580713 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-210ENST00000580713 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
TOP3A-210ENST00000580713 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 NFIAQ12857 509 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.25
TOP3A-210ENST00000580713 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 HMGCRP04035 888 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 PTPRAP18433 802 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 LRRC24Q50LG9 513 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 ZSCAN29Q8IWY8 852 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-210ENST00000580713 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
TOP3A-210ENST00000580713 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
TOP3A-210ENST00000580713 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 GABBR2O75899 941 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-210ENST00000580713 IFIT1P09914 478 aaKnown RBP13.44□□□□□ -0.26
TOP3A-210ENST00000580713 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 SLC4A10Q6U841 1118 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 ZFPM1Q8IX07 1006 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
TOP3A-210ENST00000580713 PDE8BO95263 885 aa13.43□□□□□ -0.26
TOP3A-210ENST00000580713 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
TOP3A-210ENST00000580713 TRIM32Q13049 653 aa13.43□□□□□ -0.26
TOP3A-210ENST00000580713 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
TOP3A-210ENST00000580713 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
TOP3A-210ENST00000580713 UNC80Q8N2C7 3258 aa13.43□□□□□ -0.26
TOP3A-210ENST00000580713 DOCK3Q8IZD9 2030 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 VAMP4O75379 141 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 OGDHLQ9ULD0 1010 aa13.42□□□□□ -0.26
TOP3A-210ENST00000580713 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-210ENST00000580713 RGS3P49796 1198 aa13.41□□□□□ -0.26
TOP3A-210ENST00000580713 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
TOP3A-210ENST00000580713 FAM109BQ6ICB4 259 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-210ENST00000580713 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-210ENST00000580713 PRDM6Q9NQX0 595 aa13.41□□□□□ -0.26
TOP3A-210ENST00000580713 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
TOP3A-210ENST00000580713 CTNND1O60716 968 aaKnown RBP13.4□□□□□ -0.26
TOP3A-210ENST00000580713 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
TOP3A-210ENST00000580713 SLC5A1P13866 664 aa13.4□□□□□ -0.26
TOP3A-210ENST00000580713 CYP2B6P20813 491 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms