RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 CCL15Q16663 113 aa24.59■■□□□ 1.53
SMG8-204ENST00000580498 ZNF296Q8WUU4 475 aaPredicted RBP24.59■■□□□ 1.53
SMG8-204ENST00000580498 TESPA1A2RU30 521 aaPredicted RBP24.58■■□□□ 1.53
SMG8-204ENST00000580498 NPM3O75607 178 aaKnown RBP24.58■■□□□ 1.53
SMG8-204ENST00000580498 PPATQ06203 517 aa24.58■■□□□ 1.53
SMG8-204ENST00000580498 PPIL2Q13356 520 aa24.58■■□□□ 1.53
SMG8-204ENST00000580498 CERS3Q8IU89 383 aa24.58■■□□□ 1.53
SMG8-204ENST00000580498 ZKSCAN4Q969J2 545 aaPredicted RBP24.58■■□□□ 1.53
SMG8-204ENST00000580498 DBNLQ9UJU6 430 aaKnown RBP24.58■■□□□ 1.53
SMG8-204ENST00000580498 SNCAIPQ9Y6H5 919 aa24.58■■□□□ 1.53
SMG8-204ENST00000580498 DOCK2Q92608 1830 aa24.58■■□□□ 1.53
SMG8-204ENST00000580498 IFIT2P09913 472 aaKnown RBP24.57■■□□□ 1.52
SMG8-204ENST00000580498 GJA5P36382 358 aa24.57■■□□□ 1.52
SMG8-204ENST00000580498 TMED8Q6PL24 325 aaPredicted RBP24.57■■□□□ 1.52
SMG8-204ENST00000580498 RHPN1Q8TCX5 695 aa24.57■■□□□ 1.52
SMG8-204ENST00000580498 EAF2Q96CJ1 260 aaPredicted RBP24.57■■□□□ 1.52
SMG8-204ENST00000580498 PICK1Q9NRD5 415 aa24.57■■□□□ 1.52
SMG8-204ENST00000580498 MAST2Q6P0Q8 1798 aa24.57■■□□□ 1.52
SMG8-204ENST00000580498 ARHGEF6Q15052 776 aa24.56■■□□□ 1.52
SMG8-204ENST00000580498 TEX11Q8IYF3 940 aa24.56■■□□□ 1.52
SMG8-204ENST00000580498 ZFYVE28Q9HCC9 887 aa24.56■■□□□ 1.52
SMG8-204ENST00000580498 APBB1O00213 710 aa24.55■■□□□ 1.52
SMG8-204ENST00000580498 IGF2BP3O00425 579 aaKnown RBP eCLIP24.55■■□□□ 1.52
SMG8-204ENST00000580498 ZAP70P43403 619 aa24.55■■□□□ 1.52
SMG8-204ENST00000580498 ERO1AQ96HE7 468 aa24.55■■□□□ 1.52
SMG8-204ENST00000580498 ZCCHC17Q9NP64 241 aaKnown RBP24.55■■□□□ 1.52
SMG8-204ENST00000580498 ZNF112Q9UJU3 913 aa24.55■■□□□ 1.52
SMG8-204ENST00000580498 CYP2E1P05181 493 aaPredicted RBP24.54■■□□□ 1.52
SMG8-204ENST00000580498 INPP5BP32019 993 aa24.54■■□□□ 1.52
SMG8-204ENST00000580498 MAP3K12Q12852 859 aa24.54■■□□□ 1.52
SMG8-204ENST00000580498 TTF1Q15361 905 aaPredicted RBP24.54■■□□□ 1.52
SMG8-204ENST00000580498 TAF1CQ15572 869 aaPredicted RBP24.54■■□□□ 1.52
SMG8-204ENST00000580498 NOL9Q5SY16 702 aaKnown RBP24.54■■□□□ 1.52
SMG8-204ENST00000580498 MS4A4AQ96JQ5 239 aa24.54■■□□□ 1.52
SMG8-204ENST00000580498 IL1RAPL2Q9NP60 686 aa24.54■■□□□ 1.52
SMG8-204ENST00000580498 IDH1O75874 414 aaKnown RBP24.53■■□□□ 1.52
SMG8-204ENST00000580498 CNKSR2Q8WXI2 1034 aa24.53■■□□□ 1.52
SMG8-204ENST00000580498 TRIM34Q9BYJ4 488 aa24.53■■□□□ 1.52
SMG8-204ENST00000580498 TLR7Q9NYK1 1049 aaKnown RBP24.53■■□□□ 1.52
SMG8-204ENST00000580498 RFX7Q2KHR2 1363 aa24.53■■□□□ 1.52
SMG8-204ENST00000580498 RHBDL3P58872 404 aa24.52■■□□□ 1.52
SMG8-204ENST00000580498 CRHR2Q13324 411 aa24.52■■□□□ 1.52
SMG8-204ENST00000580498 ZFPM1Q8IX07 1006 aa24.52■■□□□ 1.52
SMG8-204ENST00000580498 BRI3BPQ8WY22 251 aa24.52■■□□□ 1.52
SMG8-204ENST00000580498 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
SMG8-204ENST00000580498 DHX36Q9H2U1 1008 aaKnown RBP24.52■■□□□ 1.52
SMG8-204ENST00000580498 AATFQ9NY61 560 aaKnown RBP eCLIP24.52■■□□□ 1.52
SMG8-204ENST00000580498 IRF6O14896 467 aa24.51■■□□□ 1.51
SMG8-204ENST00000580498 SCYL3Q8IZE3 742 aa24.51■■□□□ 1.51
SMG8-204ENST00000580498 OSBPL5Q9H0X9 879 aaPredicted RBP24.51■■□□□ 1.51
SMG8-204ENST00000580498 DDX4Q9NQI0 724 aaKnown RBP24.51■■□□□ 1.51
SMG8-204ENST00000580498 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
SMG8-204ENST00000580498 CTNND1O60716 968 aaKnown RBP24.5■■□□□ 1.51
SMG8-204ENST00000580498 CYP7A1P22680 504 aa24.5■■□□□ 1.51
SMG8-204ENST00000580498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.5■■□□□ 1.51
SMG8-204ENST00000580498 ATRNL1Q5VV63 1379 aa24.5■■□□□ 1.51
SMG8-204ENST00000580498 DDTLA6NHG4 134 aaPredicted RBP24.49■■□□□ 1.51
SMG8-204ENST00000580498 TBC1D12O60347 775 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 PPP4CP60510 307 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 SP3Q02447 781 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 KIF22Q14807 665 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 ZNF384Q8TF68 577 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 PTPN18Q99952 460 aa24.49■■□□□ 1.51
SMG8-204ENST00000580498 CXCL11O14625 94 aa24.48■■□□□ 1.51
SMG8-204ENST00000580498 FBXO46Q6PJ61 603 aaPredicted RBP24.48■■□□□ 1.51
SMG8-204ENST00000580498 SH3RF3Q8TEJ3 882 aaPredicted RBP24.48■■□□□ 1.51
SMG8-204ENST00000580498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.48■■□□□ 1.51
SMG8-204ENST00000580498 PIH1D3Q9NQM4 214 aaKnown RBP24.48■■□□□ 1.51
SMG8-204ENST00000580498 PI4KBQ9UBF8 816 aa24.48■■□□□ 1.51
SMG8-204ENST00000580498 HERC5Q9UII4 1024 aaKnown RBP24.48■■□□□ 1.51
SMG8-204ENST00000580498 HLA-DOAP06340 250 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 MAP3K10Q02779 954 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 C20orf194Q5TEA3 1177 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 FASTKD5Q7L8L6 764 aaKnown RBP24.47■■□□□ 1.51
SMG8-204ENST00000580498 MAGEB6Q8N7X4 407 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 LRRCC1Q9C099 1032 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 KCNH4Q9UQ05 1017 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 TRIM17Q9Y577 477 aa24.47■■□□□ 1.51
SMG8-204ENST00000580498 SH3BP5LQ7L8J4 393 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 CRACR2BQ8N4Y2 399 aaPredicted RBP24.46■■□□□ 1.51
SMG8-204ENST00000580498 TGFBRAP1Q8WUH2 860 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 TBC1D2Q9BYX2 928 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 R3HDMLQ9H3Y0 253 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 ZHX2Q9Y6X8 837 aa24.46■■□□□ 1.51
SMG8-204ENST00000580498 PHF20L1A8MW92 1017 aa24.45■■□□□ 1.5
SMG8-204ENST00000580498 BTBD19C9JJ37 291 aa24.45■■□□□ 1.5
SMG8-204ENST00000580498 USP5P45974 858 aa24.45■■□□□ 1.5
SMG8-204ENST00000580498 ANKRD23Q86SG2 305 aa24.45■■□□□ 1.5
SMG8-204ENST00000580498 SIRT2Q8IXJ6 389 aa24.45■■□□□ 1.5
SMG8-204ENST00000580498 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.5
SMG8-204ENST00000580498 DNAJC2Q99543 621 aaKnown RBP24.45■■□□□ 1.5
SMG8-204ENST00000580498 GPATCH3Q96I76 525 aa24.44■■□□□ 1.5
SMG8-204ENST00000580498 EFCC1Q9HA90 598 aa24.44■■□□□ 1.5
SMG8-204ENST00000580498 DOCK1Q14185 1865 aa24.44■■□□□ 1.5
SMG8-204ENST00000580498 PTPRAP18433 802 aa24.43■■□□□ 1.5
SMG8-204ENST00000580498 MAPKAPK5Q8IW41 473 aa24.43■■□□□ 1.5
SMG8-204ENST00000580498 PARK7Q99497 189 aaKnown RBP24.43■■□□□ 1.5
SMG8-204ENST00000580498 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.43■■□□□ 1.5
SMG8-204ENST00000580498 HPS5Q9UPZ3 1129 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms