RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 C7orf43Q8WVR3 580 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PSME4Q14997 1843 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PTPDC1A2A3K4 754 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 F13A1P00488 732 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 CYP2D6P10635 497 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 BTDP43251 543 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LARP1BQ659C4 914 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 CERS5Q8N5B7 392 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 IGDCC4Q8TDY8 1250 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 TRAK2O60296 914 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LDHCP07864 332 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 TMEM67Q5HYA8 995 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MXD3Q9BW11 206 aa17.44■□□□□ 0.38
CDK5RAP3-218ENST00000580391 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PPFIA3O75145 1194 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 BAG3O95817 575 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PPP4CP60510 307 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 SLC4A8Q2Y0W8 1093 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ZKSCAN3Q9BRR0 538 aa17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ARPP21Q9UBL0 812 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-218ENST00000580391 GAKO14976 1311 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 IFIT3O14879 490 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 G3V3G9 751 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PRDM1O75626 825 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 USP17L8P0C7I0 530 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PDCP20941 246 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 USP5P45974 858 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DCAF8Q5TAQ9 597 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 APOA5Q6Q788 366 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
CDK5RAP3-218ENST00000580391 F8W031 263 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 C21orf2O43822 256 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 RXRAP19793 462 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 SBK1Q52WX2 424 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 SGMS1Q86VZ5 419 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 TGFBRAP1Q8WUH2 860 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LMBRD1Q9NUN5 540 aa17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DPEP1P16444 411 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 PTMSP20962 102 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 AOC3Q16853 763 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ESR2Q92731 530 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 DAGLAQ9Y4D2 1042 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MYH6P13533 1939 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MYH8P13535 1937 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 ECE2O60344 883 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 FGRP09769 529 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 LIFRP42702 1097 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 HMGN5P82970 282 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 MAPKAPK5Q8IW41 473 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 FAM184AQ8NB25 1140 aa17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-218ENST00000580391 KCNA3P22001 575 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FOSBP53539 338 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 RHBDL3P58872 404 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 WTAPQ15007 396 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FERMT3Q86UX7 667 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 TNKSO95271 1327 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CCDC144CPQ8IYA2 1237 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 GDPD2Q9HCC8 539 aa17.39■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CCDC69A6NI79 296 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ZBTB43O43298 467 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PCP11498 1178 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FDPSP14324 419 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CERS3Q8IU89 383 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms