RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CARS2Q9HA77 564 aaKnown RBP5.22□□□□□ -1.57
KPNB1-208ENST00000580019 ZNF385BQ569K4 471 aa5.21□□□□□ -1.58
KPNB1-208ENST00000580019 ABHD4Q8TB40 342 aa5.21□□□□□ -1.58
KPNB1-208ENST00000580019 NUDT16Q96DE0 195 aaKnown RBP5.21□□□□□ -1.58
KPNB1-208ENST00000580019 TFIP11Q9UBB9 837 aaKnown RBP5.21□□□□□ -1.58
KPNB1-208ENST00000580019 CNOT6Q9ULM6 557 aaKnown RBP5.21□□□□□ -1.58
KPNB1-208ENST00000580019 OTOL1A6NHN0 477 aaPredicted RBP5.2□□□□□ -1.58
KPNB1-208ENST00000580019 EDN3P14138 238 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 RAC2P15153 192 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 CLCN7P51798 805 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 PCDH1Q08174 1060 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 TOP6BLQ8N6T0 577 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 DDX54Q8TDD1 881 aaKnown RBP5.2□□□□□ -1.58
KPNB1-208ENST00000580019 HEXIM2Q96MH2 286 aaKnown RBP5.2□□□□□ -1.58
KPNB1-208ENST00000580019 GTF2IRD1Q9UHL9 959 aa5.2□□□□□ -1.58
KPNB1-208ENST00000580019 IGF2BP3O00425 579 aaKnown RBP eCLIP5.19□□□□□ -1.58
KPNB1-208ENST00000580019 TMPRSS2O15393 492 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 ECEL1O95672 775 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 DLG4P78352 724 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 PDE3AQ14432 1141 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 KANK4Q5T7N3 995 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-208ENST00000580019 ABTB2Q8N961 1025 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 CHRDQ9H2X0 955 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 PCOLCE2Q9UKZ9 415 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
KPNB1-208ENST00000580019 RFXAPO00287 272 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 ZNF423Q2M1K9 1284 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 FANCD2OSQ96PS1 177 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 CLEC4MQ9H2X3 399 aaPredicted RBP5.18□□□□□ -1.58
KPNB1-208ENST00000580019 SEMA3GQ9NS98 782 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 STIM2Q9P246 746 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 SRRDQ9UH36 339 aa5.18□□□□□ -1.58
KPNB1-208ENST00000580019 ZBTB39O15060 712 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 RNGTTO60942 597 aaKnown RBP5.17□□□□□ -1.58
KPNB1-208ENST00000580019 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 NPAS4Q8IUM7 802 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 GPR20Q99678 358 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 TRIM56Q9BRZ2 755 aaKnown RBP5.17□□□□□ -1.58
KPNB1-208ENST00000580019 WDR26Q9H7D7 661 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 KCTD3Q9Y597 815 aa5.17□□□□□ -1.58
KPNB1-208ENST00000580019 SEMA7AO75326 666 aa5.16□□□□□ -1.58
KPNB1-208ENST00000580019 ZXDAP98168 799 aa5.16□□□□□ -1.58
KPNB1-208ENST00000580019 ID3Q02535 119 aa5.16□□□□□ -1.58
KPNB1-208ENST00000580019 FAM214BQ7L5A3 538 aa5.16□□□□□ -1.58
KPNB1-208ENST00000580019 GNAT3A8MTJ3 354 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 METTL12A8MUP2 240 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 SLFN14P0C7P3 912 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 FLIIQ13045 1269 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 FAM200AQ8TCP9 573 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 PRIMPOLQ96LW4 560 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 TEPSINQ96N21 525 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 MCOLN1Q9GZU1 580 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 C1orf115Q9H7X2 142 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 VRTNQ9H8Y1 702 aa5.15□□□□□ -1.59
KPNB1-208ENST00000580019 EREGO14944 169 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 RAD21O60216 631 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 PCSK2P16519 638 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 PLP2Q04941 152 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 TTLL4Q14679 1199 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 TTC16Q8NEE8 873 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 POM121Q96HA1 1249 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 ALPK1Q96QP1 1244 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 DISC1Q9NRI5 854 aa5.14□□□□□ -1.59
KPNB1-208ENST00000580019 A0A096LPE4 126 aa5.13□□□□□ -1.59
KPNB1-208ENST00000580019 A0A1W2PPZ6 126 aa5.13□□□□□ -1.59
KPNB1-208ENST00000580019 FEZF2Q8TBJ5 459 aa5.13□□□□□ -1.59
KPNB1-208ENST00000580019 MYLIPQ8WY64 445 aa5.13□□□□□ -1.59
KPNB1-208ENST00000580019 ATP13A1Q9HD20 1204 aa5.13□□□□□ -1.59
KPNB1-208ENST00000580019 ARID3CA6NKF2 412 aa5.12□□□□□ -1.59
KPNB1-208ENST00000580019 PEX10O60683 326 aa5.12□□□□□ -1.59
KPNB1-208ENST00000580019 HCLS1P14317 486 aaPredicted RBP5.12□□□□□ -1.59
KPNB1-208ENST00000580019 TTC6Q86TZ1 520 aa5.12□□□□□ -1.59
KPNB1-208ENST00000580019 SSU72Q9NP77 194 aaKnown RBP5.12□□□□□ -1.59
KPNB1-208ENST00000580019 LIG1P18858 919 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 AP3B2Q13367 1082 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 NAA30Q147X3 362 aaPredicted RBP5.11□□□□□ -1.59
KPNB1-208ENST00000580019 PEAR1Q5VY43 1037 aaPredicted RBP5.11□□□□□ -1.59
KPNB1-208ENST00000580019 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.11□□□□□ -1.59
KPNB1-208ENST00000580019 ZDHHC14Q8IZN3 488 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 SLC16A11Q8NCK7 471 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 SORCS2Q96PQ0 1159 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 MENTQ9BUN1 341 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 LATS2Q9NRM7 1088 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 PALD1Q9ULE6 856 aa5.11□□□□□ -1.59
KPNB1-208ENST00000580019 MYOCOSA0A1B0GUC4 107 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 ZC3H12DA2A288 527 aaKnown RBP5.1□□□□□ -1.59
KPNB1-208ENST00000580019 PRMT3O60678 531 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 PHACTR2O75167 634 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 B3GALT4O96024 378 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 HNRNPUQ00839 825 aaKnown RBP eCLIP5.1□□□□□ -1.59
KPNB1-208ENST00000580019 C8orf34Q49A92 452 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 TMEM132EQ6IEE7 984 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 LSRQ86X29 649 aaPredicted RBP5.1□□□□□ -1.59
KPNB1-208ENST00000580019 IRF2BP1Q8IU81 584 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 SP8Q8IXZ3 490 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 GGNBP2Q9H3C7 697 aa5.1□□□□□ -1.59
KPNB1-208ENST00000580019 TEX51A0A1B0GUA7 166 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 A6NHS1 94 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 TNFRSF1AP19438 455 aa5.09□□□□□ -1.59
KPNB1-208ENST00000580019 HMGA2P52926 109 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms