RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
MSI2-206ENST00000579180 CYP2D7A0A087X1C5 515 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 MCM5P33992 734 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 USP5P45974 858 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 CRKP46108 304 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 ANTXR2P58335 489 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 TRDNQ13061 729 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
MSI2-206ENST00000579180 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
MSI2-206ENST00000579180 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
MSI2-206ENST00000579180 LARGE1O95461 756 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 VIL1P09327 827 aaKnown RBP18.61■□□□□ 0.57
MSI2-206ENST00000579180 ME3Q16798 604 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 CHST3Q7LGC8 479 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 TEX11Q8IYF3 940 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
MSI2-206ENST00000579180 ZDHHC15Q96MV8 337 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 CNNM2Q9H8M5 875 aa18.61■□□□□ 0.57
MSI2-206ENST00000579180 SH2B1Q9NRF2 756 aaPredicted RBP18.61■□□□□ 0.57
MSI2-206ENST00000579180 MYO3BQ8WXR4 1341 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 B4E1Z4 1266 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 PRC1O43663 620 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 RAD17O75943 681 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 FGRP09769 529 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 APOBEC3HQ6NTF7 200 aaKnown RBP18.6■□□□□ 0.57
MSI2-206ENST00000579180 RSBN1LQ6PCB5 846 aaPredicted RBP18.6■□□□□ 0.57
MSI2-206ENST00000579180 CYB5R4Q7L1T6 521 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 RNF41Q9H4P4 317 aaPredicted RBP18.6■□□□□ 0.57
MSI2-206ENST00000579180 MCM9Q9NXL9 1143 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 PSMD14O00487 310 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 USP17L8P0C7I0 530 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 EVX2Q03828 476 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 BRF1Q92994 677 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 GMLQ99445 158 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 KRT23Q9C075 422 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
MSI2-206ENST00000579180 FLT1P17948 1338 aa18.59■□□□□ 0.57
MSI2-206ENST00000579180 CYP2D6P10635 497 aa18.59■□□□□ 0.57
MSI2-206ENST00000579180 PCP11498 1178 aaKnown RBP18.59■□□□□ 0.57
MSI2-206ENST00000579180 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
MSI2-206ENST00000579180 MAPKAPK5Q8IW41 473 aa18.59■□□□□ 0.57
MSI2-206ENST00000579180 DICER1Q9UPY3 1922 aaKnown RBP18.58■□□□□ 0.57
MSI2-206ENST00000579180 PRELPP51888 382 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 EVCP57679 992 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 RASSF7Q02833 373 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 CXCL9Q07325 125 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 ST3GAL1Q11201 340 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 CDC42EP5Q6NZY7 148 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 USP40Q9NVE5 1235 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 ZSWIM5Q9P217 1185 aa18.58■□□□□ 0.56
MSI2-206ENST00000579180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.58■□□□□ 0.56
MSI2-206ENST00000579180 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 SBF1O95248 1867 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 KDM4AO75164 1064 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
MSI2-206ENST00000579180 FGD1P98174 961 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 STK11IPQ8N1F8 1099 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 JDP2Q8WYK2 163 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
MSI2-206ENST00000579180 GPHNQ9NQX3 736 aaPredicted RBP18.57■□□□□ 0.56
MSI2-206ENST00000579180 PCDHAC2Q9Y5I4 1007 aa18.57■□□□□ 0.56
MSI2-206ENST00000579180 SYT17Q9BSW7 474 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 CIZ1Q9ULV3 898 aaPredicted RBP18.56■□□□□ 0.56
MSI2-206ENST00000579180 ORC4O43929 436 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 IGDCC4Q8TDY8 1250 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 CHMP5Q9NZZ3 219 aa18.56■□□□□ 0.56
MSI2-206ENST00000579180 SH2B2O14492 632 aaPredicted RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 SLC3A2P08195 630 aaKnown RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 RRP12Q5JTH9 1297 aaKnown RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 CIAPIN1Q6FI81 312 aa18.55■□□□□ 0.56
MSI2-206ENST00000579180 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
MSI2-206ENST00000579180 AGBL3Q8NEM8 1001 aa18.55■□□□□ 0.56
MSI2-206ENST00000579180 DDX4Q9NQI0 724 aaKnown RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 SAP30BPQ9UHR5 308 aaKnown RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 ZBTB12Q9Y330 459 aaPredicted RBP18.55■□□□□ 0.56
MSI2-206ENST00000579180 PLCD1P51178 756 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 RBM5P52756 815 aaKnown RBP eCLIP18.54■□□□□ 0.56
MSI2-206ENST00000579180 CFAP100Q494V2 611 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 ESR2Q92731 530 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 ZNF274Q96GC6 653 aaPredicted RBP18.54■□□□□ 0.56
MSI2-206ENST00000579180 MTA3Q9BTC8 594 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 TOMM22Q9NS69 142 aa18.54■□□□□ 0.56
MSI2-206ENST00000579180 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
MSI2-206ENST00000579180 PFKFB2O60825 505 aa18.53■□□□□ 0.56
MSI2-206ENST00000579180 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
MSI2-206ENST00000579180 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
MSI2-206ENST00000579180 GTF3C6Q969F1 213 aa18.53■□□□□ 0.56
MSI2-206ENST00000579180 BRPF3Q9ULD4 1205 aa18.53■□□□□ 0.56
MSI2-206ENST00000579180 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.53■□□□□ 0.56
MSI2-206ENST00000579180 FZD9O00144 591 aa18.52■□□□□ 0.56
MSI2-206ENST00000579180 PRDM1O75626 825 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms