RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SMIM5Q71RC9 77 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 TSPYL6Q8N831 410 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 C8orf58Q8NAV2 365 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 TSR2Q969E8 191 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 ESYT1Q9BSJ8 1104 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 ZCCHC2Q9C0B9 1178 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 PRR12Q9ULL5 1215 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 ZBTB1Q9Y2K1 713 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 USP16Q9Y5T5 823 aa4.95□□□□□ -1.62
SMARCE1-215ENST00000578995 LTBP1Q14766 1721 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 COL15A1P39059 1388 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 NEFMP07197 916 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 HOXB7P09629 217 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 CRKLP46109 303 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 EIF5P55010 431 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 GNAI1P63096 354 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 SLC15A2Q16348 729 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 PROSER3Q2NL68 480 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 TMEM214Q6NUQ4 689 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 LRRN4Q8WUT4 740 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 CNKSR1Q969H4 720 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 PRDM6Q9NQX0 595 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 TSPYL4Q9UJ04 414 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 FER1L6Q2WGJ9 1857 aa4.94□□□□□ -1.62
SMARCE1-215ENST00000578995 DICER1Q9UPY3 1922 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 ATXN7O15265 892 aaPredicted RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 VAMP4O75379 141 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 A1BGP04217 495 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 SNRPA1P09661 255 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 EXOSC9Q06265 439 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 SF3B2Q13435 895 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 C4orf17Q53FE4 359 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 NLRP8Q86W28 1048 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 COL23A1Q86Y22 540 aaPredicted RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 CCDC87Q9NVE4 849 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 DNAAF2Q9NVR5 837 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 ATP10DQ9P241 1426 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 PXDNLA1KZ92 1463 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 USP42Q9H9J4 1324 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 PSME4Q14997 1843 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 SLX4Q8IY92 1834 aa4.93□□□□□ -1.62
SMARCE1-215ENST00000578995 CHD4Q14839 1912 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 C10orf71Q711Q0 1435 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 M0R082 166 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 GNRH1P01148 92 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 MAPTP10636 758 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 CD33P20138 364 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 SSFA2P28290 1259 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 IL6STP40189 918 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 PIP4K2AP48426 406 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 HNRNPUQ00839 825 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 CALD1Q05682 793 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 TNP2Q05952 138 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 COL9A3Q14050 684 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 R3HDM1Q15032 1099 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 RNF20Q5VTR2 975 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 SLC51AQ86UW1 340 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 TTC5Q8N0Z6 440 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 ZNF417Q8TAU3 575 aa4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 LENG1Q96BZ8 264 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 ZNF587Q96SQ5 575 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-215ENST00000578995 ADCY9O60503 1353 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 SRCAPQ6ZRS2 3230 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 RIC1Q4ADV7 1423 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 E9PSI1 815 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 CAMTA2O94983 1202 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 ANXA1P04083 346 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 GYS1P13807 737 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 SELPP16109 830 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 SSTR4P31391 388 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 TWISTNBQ3B726 338 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 TTLL7Q6ZT98 887 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 G2E3Q7L622 706 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 SSBP4Q9BWG4 385 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 TEX13AQ9BXU3 409 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 OSBPL3Q9H4L5 887 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 DDX21Q9NR30 783 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 STK32BQ9NY57 414 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 CHPF2Q9P2E5 772 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 SRP68Q9UHB9 627 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 OAS3Q9Y6K5 1087 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 CARMIL3Q8ND23 1372 aa4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 IBTKQ9P2D0 1353 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-215ENST00000578995 ARAP2Q8WZ64 1704 aa4.9□□□□□ -1.62
SMARCE1-215ENST00000578995 DCDC2BA2VCK2 349 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 ELL2O00472 640 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 KHNYNO15037 678 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 TRAK2O60296 914 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 IL2RAP01589 272 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 TM4SF1P30408 202 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 BRPF1P55201 1214 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 DDR1Q08345 913 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 RHBDD1Q8TEB9 315 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 AK7Q96M32 723 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 MYH16Q9H6N6 1097 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 PHAXQ9H814 394 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 RAB6BQ9NRW1 208 aa4.9□□□□□ -1.63
SMARCE1-215ENST00000578995 NARFQ9UHQ1 456 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms