RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 OPTNQ96CV9 577 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 OTUD5Q96G74 571 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 WNK4Q96J92 1243 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 RWDD1Q9H446 243 aaPredicted RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 ANTXR1Q9H6X2 564 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 PRDM10Q9NQV6 1147 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 PICK1Q9NRD5 415 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 PAG1Q9NWQ8 432 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 RNF186Q9NXI6 227 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 MAGEB6P1A0A0J9YX57 407 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 TBC1D8O95759 1140 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 ALDH1A1P00352 501 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 TM4SF4P48230 202 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 GTF2A2P52657 109 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 RHBDL3P58872 404 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 PPP4CP60510 307 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.94□□□□□ -1.14
TRAF4-213ENST00000578917 ERO1BQ86YB8 467 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 CERS3Q8IU89 383 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 MAPKAPK5Q8IW41 473 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 ZNF384Q8TF68 577 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 DHX36Q9H2U1 1008 aaKnown RBP7.94□□□□□ -1.14
TRAF4-213ENST00000578917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRAF4-213ENST00000578917 DDX4Q9NQI0 724 aaKnown RBP7.94□□□□□ -1.14
TRAF4-213ENST00000578917 SAGE1Q9NXZ1 904 aa7.94□□□□□ -1.14
TRAF4-213ENST00000578917 CCL15-CCL14A0A0B4J2E2 113 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 DDTLA6NHG4 134 aaPredicted RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 ERC2O15083 957 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 HLA-DOAP06340 250 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 CETPP11597 493 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 INPP5BP32019 993 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 DYNLL1P63167 89 aaKnown RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 SNAPC2Q13487 334 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 CCL15Q16663 113 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 ZSCAN25Q6NSZ9 544 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 TMED8Q6PL24 325 aaPredicted RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 IFNL1Q8IU54 200 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 EXOC6Q8TAG9 804 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 CNKSR2Q8WXI2 1034 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 GCC1Q96CN9 775 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 DDRGK1Q96HY6 314 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 CRNKL1Q9BZJ0 848 aaKnown RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 OSBPL5Q9H0X9 879 aaPredicted RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 PI4KBQ9UBF8 816 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
TRAF4-213ENST00000578917 ZHX2Q9Y6X8 837 aa7.93□□□□□ -1.14
TRAF4-213ENST00000578917 POLR2AP24928 1970 aaKnown RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 SPDYE5A6NIY4 337 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 CTNND1O60716 968 aaKnown RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 NPM3O75607 178 aaKnown RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 CAPN15O75808 1086 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 PDE6AP16499 860 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 IRX6P78412 446 aaPredicted RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 PPATQ06203 517 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 LRRFIP1Q32MZ4 808 aaKnown RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 ADGRA1Q86SQ6 560 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 FOXP4Q8IVH2 680 aaPredicted RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 EDC3Q96F86 508 aaKnown RBP7.92□□□□□ -1.14
TRAF4-213ENST00000578917 HAUS7Q99871 368 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 PALD1Q9ULE6 856 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 ZNF532Q9HCE3 1301 aa7.92□□□□□ -1.14
TRAF4-213ENST00000578917 FAM196BA6NMK8 535 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 IRF6O14896 467 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 GJA5P36382 358 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 PPIL2Q13356 520 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 HDAC1Q13547 482 aaPredicted RBP7.91□□□□□ -1.14
TRAF4-213ENST00000578917 TSHZ3Q63HK5 1081 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 TTC6Q86TZ1 520 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 SCYL3Q8IZE3 742 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 HERC5Q9UII4 1024 aaKnown RBP7.91□□□□□ -1.14
TRAF4-213ENST00000578917 ZNF112Q9UJU3 913 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 SNCAIPQ9Y6H5 919 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 RPAP1Q9BWH6 1393 aaPredicted RBP7.91□□□□□ -1.14
TRAF4-213ENST00000578917 PAPPA2Q9BXP8 1791 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 PSME4Q14997 1843 aa7.91□□□□□ -1.14
TRAF4-213ENST00000578917 TRPM7Q96QT4 1865 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 SSC5DA1L4H1 1573 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 FLT1P17948 1338 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 TRIM75PA6NK02 468 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 PHF20L1A8MW92 1017 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 TBC1D12O60347 775 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 GLRX3O76003 335 aaKnown RBP7.9□□□□□ -1.14
TRAF4-213ENST00000578917 APPP05067 770 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 MX1P20591 662 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 DGKZQ13574 1117 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.14
TRAF4-213ENST00000578917 GADL1Q6ZQY3 521 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 FASTKD5Q7L8L6 764 aaKnown RBP7.9□□□□□ -1.14
TRAF4-213ENST00000578917 BRI3BPQ8WY22 251 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 MS4A4AQ96JQ5 239 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 ARMT1Q9H993 441 aa7.9□□□□□ -1.14
TRAF4-213ENST00000578917 ZFYVE28Q9HCC9 887 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms