RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 USP40Q9NVE5 1235 aa15.93■□□□□ 0.14
SRSF1-202ENST00000578430 MKRN1Q9UHC7 482 aaKnown RBP15.93■□□□□ 0.14
SRSF1-202ENST00000578430 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
SRSF1-202ENST00000578430 E7EWF7 191 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
SRSF1-202ENST00000578430 NEK4P51957 841 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 RBM5P52756 815 aaKnown RBP eCLIP15.92■□□□□ 0.14
SRSF1-202ENST00000578430 CFAP100Q494V2 611 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 BLOC1S2Q6QNY1 142 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 CNNM2Q9H8M5 875 aa15.92■□□□□ 0.14
SRSF1-202ENST00000578430 ZC3H4Q9UPT8 1303 aaKnown RBP15.92■□□□□ 0.14
SRSF1-202ENST00000578430 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
SRSF1-202ENST00000578430 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
SRSF1-202ENST00000578430 PPARAQ07869 468 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 TRDNQ13061 729 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 DLGAP5Q15398 846 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 CDC42EP5Q6NZY7 148 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 RUFY3Q7L099 469 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 GPC2Q8N158 579 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 TGFBRAP1Q8WUH2 860 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 STAG1Q8WVM7 1258 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 ALDH8A1Q9H2A2 487 aaPredicted RBP15.91■□□□□ 0.14
SRSF1-202ENST00000578430 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
SRSF1-202ENST00000578430 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
SRSF1-202ENST00000578430 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 USP17L21D6R901 530 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 HAND2P61296 217 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 AKNAD1Q5T1N1 836 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 RALYLQ86SE5 291 aaKnown RBP15.9■□□□□ 0.14
SRSF1-202ENST00000578430 HSCBQ8IWL3 235 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 NCOA7Q8NI08 942 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
SRSF1-202ENST00000578430 IDI2Q9BXS1 227 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 RNF181Q9P0P0 153 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 FLT1P17948 1338 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
SRSF1-202ENST00000578430 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-202ENST00000578430 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-202ENST00000578430 ANKRD1Q15327 319 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 FKBP1CQ5VVH2 108 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 MFSD6Q6ZSS7 791 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 DHX32Q7L7V1 743 aaKnown RBP15.89■□□□□ 0.13
SRSF1-202ENST00000578430 MAPKAPK5Q8IW41 473 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 UPF3BQ9BZI7 483 aaKnown RBP15.89■□□□□ 0.13
SRSF1-202ENST00000578430 KRT23Q9C075 422 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 TMOD2Q9NZR1 351 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 GJA3Q9Y6H8 435 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 TAF6LQ9Y6J9 622 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
SRSF1-202ENST00000578430 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 CDK5RAP2Q96SN8 1893 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 MYO1BO43795 1136 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-202ENST00000578430 FGRP09769 529 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 TTC6Q86TZ1 520 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 TBC1D10CQ8IV04 446 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 ZBED3Q96IU2 234 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-202ENST00000578430 TTC14Q96N46 770 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 NBPF3Q9H094 633 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
SRSF1-202ENST00000578430 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-202ENST00000578430 ROBO3Q96MS0 1386 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 LAMB1P07942 1786 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 H7C1D1 291 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 ENTPD3O75355 529 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 MCM5P33992 734 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 PDE4BQ07343 736 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 POTEHQ6S545 545 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 FBXL16Q8N461 479 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 PRMT6Q96LA8 375 aaPredicted RBP15.87■□□□□ 0.13
SRSF1-202ENST00000578430 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
SRSF1-202ENST00000578430 BAZ2AQ9UIF9 1905 aaKnown RBP15.87■□□□□ 0.13
SRSF1-202ENST00000578430 ADAMTSL1Q8N6G6 1762 aa15.87■□□□□ 0.13
SRSF1-202ENST00000578430 COL2A1P02458 1487 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 DDX60LQ5H9U9 1706 aaKnown RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 K7ELQ4 463 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 ORC4O43929 436 aa15.86■□□□□ 0.13
SRSF1-202ENST00000578430 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 CTDSPL2Q05D32 466 aa15.86■□□□□ 0.13
SRSF1-202ENST00000578430 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
SRSF1-202ENST00000578430 MB21D2Q8IYB1 491 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms