RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SLC5A1P13866 664 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 PTPRAP18433 802 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 ARID4AP29374 1257 aaPredicted RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 GTF2A2P52657 109 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 LACTBP83111 547 aaPredicted RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 TNFAIP1Q13829 316 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 MTFR1Q15390 333 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 TAF1CQ15572 869 aaPredicted RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CAVIN4Q5BKX8 364 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 PRPF38BQ5VTL8 546 aaKnown RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 WDR66Q8TBY9 1149 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 SSH3Q8TE77 659 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CLUAP1Q96AJ1 413 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 NSUN4Q96CB9 384 aaKnown RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 EFCC1Q9HA90 598 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 USP40Q9NVE5 1235 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 TLR7Q9NYK1 1049 aaKnown RBP5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CEP126Q9P2H0 1117 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 CPA4Q9UI42 421 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 GABRQQ9UN88 632 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 AFG3L2Q9Y4W6 797 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 LOC285556D6RIA3 1793 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 ALPK3Q96L96 1907 aa5.56□□□□□ -1.52
PPP4R1-209ENST00000578329 MROH7-TTC4A0A0A0MT08 1334 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 DDX60LQ5H9U9 1706 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 SMIM22K7EJ46 135 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 PDHXO00330 501 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 SEMA3EO15041 775 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ZBTB7BO15156 539 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 SRGAP3O43295 1099 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ENTPD3O75355 529 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ECM2O94769 699 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 OSBPP22059 807 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 BTDP43251 543 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 MNX1P50219 401 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 PPATQ06203 517 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ATF7IPQ6VMQ6 1270 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 PRRT2Q7Z6L0 340 aaPredicted RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ANKRD23Q86SG2 305 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 SIRT2Q8IXJ6 389 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ERO1AQ96HE7 468 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 DBNDD2Q9BQY9 259 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ZNF341Q9BYN7 854 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 API5Q9BZZ5 524 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 PRO3102Q9H379 93 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 C1orf115Q9H7X2 142 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ZCCHC17Q9NP64 241 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 PIH1D3Q9NQM4 214 aaKnown RBP5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 NDUFB9Q9Y6M9 179 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 ATAD5Q96QE3 1844 aa5.55□□□□□ -1.52
PPP4R1-209ENST00000578329 COL2A1P02458 1487 aaPredicted RBP5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 CHGBP05060 677 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 CETPP11597 493 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 TNNI2P48788 182 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 SNAPC2Q13487 334 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 SCYL3Q8IZE3 742 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 SPATA5Q8NB90 893 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 SH3RF3Q8TEJ3 882 aaPredicted RBP5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 EAF2Q96CJ1 260 aaPredicted RBP5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 SNRKQ9NRH2 765 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 DBNLQ9UJU6 430 aaKnown RBP5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 DENND2AQ9ULE3 1009 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 NOP58Q9Y2X3 529 aaKnown RBP5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 CSADQ9Y600 493 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 MAST2Q6P0Q8 1798 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 AK9Q5TCS8 1911 aa5.54□□□□□ -1.52
PPP4R1-209ENST00000578329 MAST3O60307 1309 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 RLFQ13129 1914 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 CXCL11O14625 94 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 TBC1D12O60347 775 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 FRAT2O75474 233 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 NPM3O75607 178 aaKnown RBP5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 MYCP01106 439 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 PSMC4P43686 418 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 ATP8B2P98198 1209 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 PRKCZQ05513 592 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 TRIM32Q13049 653 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 SLFNL1Q499Z3 407 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 TNNI3KQ59H18 835 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 HABP4Q5JVS0 413 aaKnown RBP5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 OSBPL5Q9H0X9 879 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 ZFYVE28Q9HCC9 887 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 GJD2Q9UKL4 321 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 ZHX2Q9Y6X8 837 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 FPGT-TNNI3KV9GXZ4 949 aa5.53□□□□□ -1.52
PPP4R1-209ENST00000578329 H0YGN5 161 aa5.52□□□□□ -1.53
PPP4R1-209ENST00000578329 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
PPP4R1-209ENST00000578329 IGHA2P01877 340 aa5.52□□□□□ -1.53
PPP4R1-209ENST00000578329 GNAI2P04899 355 aa5.52□□□□□ -1.53
PPP4R1-209ENST00000578329 GNAI3P08754 354 aa5.52□□□□□ -1.53
PPP4R1-209ENST00000578329 ELNP15502 786 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms