RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 MFAP1P55081 439 aaKnown RBP13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 FOXK1P85037 733 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 GRIK5Q16478 980 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
TRAPPC8-204ENST00000578252 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 SLC34A2O95436 690 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 BAG3O95817 575 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 CRKP46108 304 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 MTMR14Q8NCE2 650 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 ZDHHC15Q96MV8 337 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
TRAPPC8-204ENST00000578252 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 H7C1D1 291 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 DSG2Q14126 1118 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 MCMDC2Q4G0Z9 681 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 PLPP6Q8IY26 295 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 CNOT7Q9UIV1 285 aaKnown RBP13.45□□□□□ -0.26
TRAPPC8-204ENST00000578252 GPR75-ASB3A0A0A6YYF3 556 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 IQCA1LA6NCM1 817 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 SCNN1DP51172 638 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 PPP4CP60510 307 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
TRAPPC8-204ENST00000578252 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 A0A0D9SFI3 127 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 GNAT2P19087 354 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 BTDP43251 543 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 FAM227BQ96M60 508 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 KRTAP3-3Q9BYR6 98 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 ADARB2Q9NS39 739 aaKnown RBP13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 UTRNP46939 3433 aa13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC8-204ENST00000578252 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 SGSM2O43147 1006 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 MYO1BO43795 1136 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 MBD4O95243 580 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 NUDT7P0C024 238 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 ADGRA1Q86SQ6 560 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 MIGA1Q8NAN2 632 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 RIOK1Q9BRS2 568 aaKnown RBP13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 PUS7LQ9H0K6 701 aaKnown RBP13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 CDK5RAP2Q96SN8 1893 aa13.42□□□□□ -0.26
TRAPPC8-204ENST00000578252 M0R2C6 588 aa13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 GPAA1O43292 621 aa13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 CHGBP05060 677 aa13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 KIF4BQ2VIQ3 1234 aa13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 ZBED3Q96IU2 234 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 TMOD2Q9NZR1 351 aa13.41□□□□□ -0.26
TRAPPC8-204ENST00000578252 REC8O95072 547 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 EPS15P42566 896 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 USP50Q70EL3 339 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 TEX11Q8IYF3 940 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 LCORLQ8N3X6 602 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
TRAPPC8-204ENST00000578252 WNT10BO00744 389 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 EPHX2P34913 555 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 RHBDL3P58872 404 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 TBC1D10BQ4KMP7 808 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 GIMAP6Q6P9H5 292 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 PNMA8AQ86V59 439 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
TRAPPC8-204ENST00000578252 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms