RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 COL22A1Q8NFW1 1626 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 GLI3P10071 1580 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 WNK3Q9BYP7 1800 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PRAMEF22A3QJZ6 481 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 ERICH4A6NGS2 130 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PPP1R12AO14974 1030 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 CLSTN1O94985 981 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 SLU7O95391 586 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 IL2RBP14784 551 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 SSR1P43307 286 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 KCNJ6P48051 423 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PDE1AP54750 535 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 EVA1CP58658 441 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 NEXNQ0ZGT2 675 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 GNL2Q13823 731 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 ZSCAN26Q16670 478 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PROSER3Q2NL68 480 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 PPP1R42Q7Z4L9 355 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 OTUD7AQ8TE49 926 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 FUCA2Q9BTY2 467 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 ZSWIM4Q9H7M6 989 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 L2HGDHQ9H9P8 463 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 AOX1Q06278 1338 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 PLCH1Q4KWH8 1693 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 ERVV-2B6SEH9 535 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 SRGAP3O43295 1099 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 TPD52L2O43399 206 aaKnown RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 NBPF7P0C2Y1 421 aaPredicted RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 SDSP20132 328 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 UBE2HP62256 183 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 MAP2K1Q02750 393 aaPredicted RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 TCEAL1Q15170 157 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 EML3Q32P44 896 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 MCTP2Q6DN12 878 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 FBXO38Q6PIJ6 1188 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 SIX5Q8N196 739 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 LINS1Q8NG48 757 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 TATDN2Q93075 761 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 ZNF496Q96IT1 587 aaPredicted RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 RBCK1Q9BYM8 510 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 CXorf56Q9H5V9 222 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 ZNF446Q9NWS9 450 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 ATP6V1DQ9Y5K8 247 aa8.04□□□□□ -1.12
KRT39-203ENST00000578078 WDR33Q9C0J8 1336 aaKnown RBP8.04□□□□□ -1.12
KRT39-203ENST00000578078 SURF6O75683 361 aaKnown RBP8.03□□□□□ -1.12
KRT39-203ENST00000578078 ZRANB2O95218 330 aaKnown RBP eCLIP8.03□□□□□ -1.12
KRT39-203ENST00000578078 ATN1P54259 1190 aaPredicted RBP8.03□□□□□ -1.12
KRT39-203ENST00000578078 SETQ01105 290 aaPredicted RBP8.03□□□□□ -1.12
KRT39-203ENST00000578078 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
KRT39-203ENST00000578078 AIMP1Q12904 312 aaKnown RBP8.03□□□□□ -1.12
KRT39-203ENST00000578078 SOGA3Q5TF21 947 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 CEP135Q66GS9 1140 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 SYT10Q6XYQ8 523 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 FBXO41Q8TF61 875 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 STAG1Q8WVM7 1258 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 A1CFQ9NQ94 594 aaKnown RBP8.03□□□□□ -1.12
KRT39-203ENST00000578078 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 SEPT3Q9UH03 358 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 PNMA3Q9UL41 463 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 PYCARDQ9ULZ3 195 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 FHOD1Q9Y613 1164 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
KRT39-203ENST00000578078 GRM8O00222 908 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 SGSM2O43147 1006 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 MYL6BP14649 208 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 IBSPP21815 317 aaPredicted RBP8.02□□□□□ -1.13
KRT39-203ENST00000578078 ANAPC15P60006 121 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
KRT39-203ENST00000578078 MTX1Q13505 466 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 MTMR3Q13615 1198 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 NBPF9Q3BBW0 867 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 NUP188Q5SRE5 1749 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
KRT39-203ENST00000578078 FAM161BQ96MY7 647 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 PRDM16Q9HAZ2 1276 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 PARP2Q9UGN5 583 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 FKBPLQ9UIM3 349 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 RRP15Q9Y3B9 282 aaKnown RBP8.02□□□□□ -1.13
KRT39-203ENST00000578078 SALL3Q9BXA9 1300 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 ITGB4P16144 1822 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 ERC2O15083 957 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 TREHO43280 583 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 SLC10A3P09131 477 aa8.02□□□□□ -1.13
KRT39-203ENST00000578078 PNMA6AP0CW24 399 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms