RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 A0A0G2JLL6 359 aaPredicted RBP17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 TCP10Q12799 353 aa17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 FAM109BQ6ICB4 259 aaPredicted RBP17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 PRRT2Q7Z6L0 340 aaPredicted RBP17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 FAM161BQ96MY7 647 aa17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 SLC45A1Q9Y2W3 748 aa17.87■□□□□ 0.45
PPP4R1-206ENST00000577779 CDH23Q9H251 3354 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 HMGCRP04035 888 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 CAVIN4Q5BKX8 364 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 HHIPL2Q6UWX4 724 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 ZHX2Q9Y6X8 837 aa17.86■□□□□ 0.45
PPP4R1-206ENST00000577779 PUS3Q9BZE2 481 aaKnown RBP17.85■□□□□ 0.45
PPP4R1-206ENST00000577779 HMX1Q9NP08 348 aaPredicted RBP17.85■□□□□ 0.45
PPP4R1-206ENST00000577779 PICK1Q9NRD5 415 aa17.85■□□□□ 0.45
PPP4R1-206ENST00000577779 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
PPP4R1-206ENST00000577779 ANKRD13CQ8N6S4 541 aa17.84■□□□□ 0.45
PPP4R1-206ENST00000577779 MROH5Q6ZUA9 1318 aa17.83■□□□□ 0.44
PPP4R1-206ENST00000577779 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
PPP4R1-206ENST00000577779 SCYL3Q8IZE3 742 aa17.83■□□□□ 0.44
PPP4R1-206ENST00000577779 OGDHLQ9ULD0 1010 aa17.83■□□□□ 0.44
PPP4R1-206ENST00000577779 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
PPP4R1-206ENST00000577779 GRM8O00222 908 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 PTPRAP18433 802 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 NFIAQ12857 509 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 CDC42EP5Q6NZY7 148 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 PTPRFP10586 1907 aa17.82■□□□□ 0.44
PPP4R1-206ENST00000577779 PFASO15067 1338 aa17.81■□□□□ 0.44
PPP4R1-206ENST00000577779 CACNA1FO60840 1977 aa17.81■□□□□ 0.44
PPP4R1-206ENST00000577779 TRIM32Q13049 653 aa17.81■□□□□ 0.44
PPP4R1-206ENST00000577779 FAM110CQ1W6H9 321 aa17.81■□□□□ 0.44
PPP4R1-206ENST00000577779 ZNF697Q5TEC3 545 aa17.81■□□□□ 0.44
PPP4R1-206ENST00000577779 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 PHF20L1A8MW92 1017 aa17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 F6X3S4 739 aa17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 MAFAQ8NHW3 353 aaPredicted RBP17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 DAGLAQ9Y4D2 1042 aa17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
PPP4R1-206ENST00000577779 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
PPP4R1-206ENST00000577779 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
PPP4R1-206ENST00000577779 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
PPP4R1-206ENST00000577779 DOCK2Q92608 1830 aa17.79■□□□□ 0.44
PPP4R1-206ENST00000577779 BDP1A6H8Y1 2624 aa17.79■□□□□ 0.44
PPP4R1-206ENST00000577779 COL9A1P20849 921 aa17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 ZFPM1Q8IX07 1006 aa17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
PPP4R1-206ENST00000577779 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 TREML2Q5T2D2 321 aa17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 WDR66Q8TBY9 1149 aa17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 LBHD1Q9BQE6 289 aaPredicted RBP17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 GJD2Q9UKL4 321 aa17.77■□□□□ 0.44
PPP4R1-206ENST00000577779 PHIPQ8WWQ0 1821 aa17.77■□□□□ 0.43
PPP4R1-206ENST00000577779 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 DOCK1Q14185 1865 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 PDE8BO95263 885 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 COL6A1P12109 1028 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 GCLCP48506 637 aaPredicted RBP17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 LRRC24Q50LG9 513 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 TRIB2Q92519 343 aa17.76■□□□□ 0.43
PPP4R1-206ENST00000577779 MAP3K21Q5TCX8 1036 aa17.75■□□□□ 0.43
PPP4R1-206ENST00000577779 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 RGS3P49796 1198 aa17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 CCDC84Q86UT8 332 aaPredicted RBP17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.74■□□□□ 0.43
PPP4R1-206ENST00000577779 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 IFIT1P09914 478 aaKnown RBP17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 CYP2B6P20813 491 aa17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 SEMA6BQ9H3T3 888 aa17.73■□□□□ 0.43
PPP4R1-206ENST00000577779 ENTPD3O75355 529 aa17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 PRDX5P30044 214 aa17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 PUM3Q15397 648 aaKnown RBP17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 MYLIPQ8WY64 445 aa17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 KAZALD1Q96I82 304 aa17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
PPP4R1-206ENST00000577779 ALDH1L1O75891 902 aa17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 LDHBP07195 334 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 SLURP2P0DP57 97 aa17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 MAP3K10Q02779 954 aa17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 NCOR1O75376 2440 aa17.71■□□□□ 0.43
PPP4R1-206ENST00000577779 CACNB2Q08289 660 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms