RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TRDNQ13061 729 aa16.12■□□□□ 0.17
RNF43-202ENST00000577625 LARP1BQ659C4 914 aaKnown RBP16.12■□□□□ 0.17
RNF43-202ENST00000577625 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
RNF43-202ENST00000577625 NACAP1Q9BZK3 213 aa16.12■□□□□ 0.17
RNF43-202ENST00000577625 NPR1P16066 1061 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 TDO2P48775 406 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 GABPB1Q06547 395 aaPredicted RBP16.11■□□□□ 0.17
RNF43-202ENST00000577625 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 POLLQ9UGP5 575 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 PDE6BP35913 854 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 SMARCC2Q8TAQ2 1214 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
RNF43-202ENST00000577625 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 JAK2O60674 1132 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
RNF43-202ENST00000577625 SPTY2D1Q68D10 685 aaPredicted RBP16.1■□□□□ 0.17
RNF43-202ENST00000577625 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
RNF43-202ENST00000577625 CYB5R4Q7L1T6 521 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 ANKRD7Q92527 254 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 B4E1Z4 1266 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 CD209Q9NNX6 404 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 OGFRQ9NZT2 677 aa16.1■□□□□ 0.17
RNF43-202ENST00000577625 RBM27Q9P2N5 1060 aaKnown RBP16.1■□□□□ 0.17
RNF43-202ENST00000577625 SYCE3A1L190 88 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 VPS37CA5D8V6 355 aaPredicted RBP16.09■□□□□ 0.17
RNF43-202ENST00000577625 IL1R1P14778 569 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 SLX4Q8IY92 1834 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 CTDNEP1O95476 244 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 NSUN7Q8NE18 718 aaKnown RBP16.09■□□□□ 0.17
RNF43-202ENST00000577625 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 MASTLQ96GX5 879 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
RNF43-202ENST00000577625 IGSF3O75054 1194 aa16.08■□□□□ 0.16
RNF43-202ENST00000577625 CCT2P78371 535 aaKnown RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 DZIP1Q86YF9 867 aaKnown RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 NCOA5Q9HCD5 579 aaKnown RBP16.08■□□□□ 0.16
RNF43-202ENST00000577625 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNF43-202ENST00000577625 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 MBD3O95983 291 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 LDHBP07195 334 aaKnown RBP16.07■□□□□ 0.16
RNF43-202ENST00000577625 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.161e-8■■□□□ 13.9
RNF43-202ENST00000577625 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 PPARAQ07869 468 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 GRIK5Q16478 980 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 CDC37L1Q7L3B6 337 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 CNNM2Q9H8M5 875 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 MYH15Q9Y2K3 1946 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 SH2B2O14492 632 aaPredicted RBP16.07■□□□□ 0.16
RNF43-202ENST00000577625 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
RNF43-202ENST00000577625 HPS5Q9UPZ3 1129 aa16.07■□□□□ 0.16
RNF43-202ENST00000577625 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 KRT23Q9C075 422 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 KDM4AO75164 1064 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 IGDCC4Q8TDY8 1250 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
RNF43-202ENST00000577625 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
RNF43-202ENST00000577625 ECM29Q5VYK3 1845 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 SMIM22K7EJ46 135 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 BAG6P46379 1132 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 C2CD5Q86YS7 1000 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 DLEC1Q9Y238 1755 aa16.05■□□□□ 0.16
RNF43-202ENST00000577625 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
RNF43-202ENST00000577625 DIXDC1Q155Q3 683 aa16.04■□□□□ 0.16
RNF43-202ENST00000577625 MPNDQ8N594 471 aa16.04■□□□□ 0.16
RNF43-202ENST00000577625 RNF214Q8ND24 703 aa16.04■□□□□ 0.16
RNF43-202ENST00000577625 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
RNF43-202ENST00000577625 LY9Q9HBG7 655 aa16.04■□□□□ 0.16
RNF43-202ENST00000577625 SENP2Q9HC62 589 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms