RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 PPIL2Q13356 520 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 EXOC6BQ9Y2D4 811 aa16.7■□□□□ 0.26
CUEDC1-204ENST00000577497 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 COG6Q9Y2V7 657 aa16.69■□□□□ 0.26
CUEDC1-204ENST00000577497 CETPP11597 493 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 PPATQ06203 517 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 NOL9Q5SY16 702 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 FBXO46Q6PJ61 603 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 OTOP1Q7RTM1 612 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 ADGRA1Q86SQ6 560 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 LRP2BPQ9P2M1 347 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 TRIM17Q9Y577 477 aa16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-204ENST00000577497 MYO5AQ9Y4I1 1855 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 ZAP70P43403 619 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 GSTO1P78417 241 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 MLLT1Q03111 559 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 MOGSQ13724 837 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 ZSWIM8A7E2V4 1837 aa16.67■□□□□ 0.26
CUEDC1-204ENST00000577497 SP3Q02447 781 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 MAP3K10Q02779 954 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
CUEDC1-204ENST00000577497 BRCA2P51587 3418 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 LDHCP07864 332 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 SCYL3Q8IZE3 742 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 ERO1AQ96HE7 468 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 ZBTB40Q9NUA8 1239 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
CUEDC1-204ENST00000577497 NAA16Q6N069 864 aaPredicted RBP16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 AACSQ86V21 672 aa16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 TEX11Q8IYF3 940 aa16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 ARHGAP39Q9C0H5 1083 aa16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
CUEDC1-204ENST00000577497 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 APBB1O00213 710 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 TLR2O60603 784 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 MS4A1P11836 297 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 PTPRAP18433 802 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 EFCC1Q9HA90 598 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
CUEDC1-204ENST00000577497 PDHXO00330 501 aa16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 ERC1Q8IUD2 1116 aa16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 RHPN1Q8TCX5 695 aa16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 ZCCHC17Q9NP64 241 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
CUEDC1-204ENST00000577497 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 ECM2O94769 699 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 GPAT2Q6NUI2 795 aa16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 CPA4Q9UI42 421 aa16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 AFG3L2Q9Y4W6 797 aa16.61■□□□□ 0.25
CUEDC1-204ENST00000577497 A0A0G2JLL6 359 aaPredicted RBP16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 TBC1D12O60347 775 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 CTNND1O60716 968 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 CTGFP29279 349 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 PPP4CP60510 307 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 PRRT2Q7Z6L0 340 aaPredicted RBP16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 RPAP2Q8IXW5 612 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms