RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RNF186Q9NXI6 227 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 SAGE1Q9NXZ1 904 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 AKAP11Q9UKA4 1901 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 WDHD1O75717 1129 aaPredicted RBP18.53■□□□□ 0.56
SMG6-220ENST00000576218 RHBDL3P58872 404 aa18.53■□□□□ 0.56
SMG6-220ENST00000576218 ZFPM1Q8IX07 1006 aa18.53■□□□□ 0.56
SMG6-220ENST00000576218 SH3RF3Q8TEJ3 882 aaPredicted RBP18.53■□□□□ 0.56
SMG6-220ENST00000576218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMG6-220ENST00000576218 OTUD5Q96G74 571 aa18.53■□□□□ 0.56
SMG6-220ENST00000576218 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
SMG6-220ENST00000576218 ANTXR1Q9H6X2 564 aa18.53■□□□□ 0.56
SMG6-220ENST00000576218 DDX4Q9NQI0 724 aaKnown RBP18.53■□□□□ 0.56
SMG6-220ENST00000576218 OTOFQ9HC10 1997 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
SMG6-220ENST00000576218 CERS3Q8IU89 383 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 ZKSCAN4Q969J2 545 aaPredicted RBP18.52■□□□□ 0.56
SMG6-220ENST00000576218 TRIM34Q9BYJ4 488 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 PAG1Q9NWQ8 432 aa18.52■□□□□ 0.56
SMG6-220ENST00000576218 INHBEP58166 350 aa18.51■□□□□ 0.55
SMG6-220ENST00000576218 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMG6-220ENST00000576218 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
SMG6-220ENST00000576218 RFX7Q2KHR2 1363 aa18.51■□□□□ 0.55
SMG6-220ENST00000576218 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
SMG6-220ENST00000576218 ALDH1A1P00352 501 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 ATP5JP18859 108 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 INPP5BP32019 993 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 USP5P45974 858 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 TM4SF4P48230 202 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 AAMPQ13685 434 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 SLC9C2Q5TAH2 1124 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
SMG6-220ENST00000576218 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 ERO1BQ86YB8 467 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 MAPKAPK5Q8IW41 473 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 OSBPL5Q9H0X9 879 aaPredicted RBP18.5■□□□□ 0.55
SMG6-220ENST00000576218 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 SNCAIPQ9Y6H5 919 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 DOCK2Q92608 1830 aa18.5■□□□□ 0.55
SMG6-220ENST00000576218 GTF2A2P52657 109 aa18.49■□□□□ 0.55
SMG6-220ENST00000576218 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
SMG6-220ENST00000576218 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
SMG6-220ENST00000576218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMG6-220ENST00000576218 PICK1Q9NRD5 415 aa18.49■□□□□ 0.55
SMG6-220ENST00000576218 MAGEB6P1A0A0J9YX57 407 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 SPDYE5A6NIY4 337 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
SMG6-220ENST00000576218 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 HLA-DOAP06340 250 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 PDE6AP16499 860 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 GJA5P36382 358 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 PPP4CP60510 307 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
SMG6-220ENST00000576218 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
SMG6-220ENST00000576218 FLT1P17948 1338 aa18.48■□□□□ 0.55
SMG6-220ENST00000576218 CCL15-CCL14A0A0B4J2E2 113 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 CCL15Q16663 113 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 SH3BP5LQ7L8J4 393 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
SMG6-220ENST00000576218 HAUS7Q99871 368 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 DHX36Q9H2U1 1008 aaKnown RBP18.47■□□□□ 0.55
SMG6-220ENST00000576218 ZNF532Q9HCE3 1301 aa18.47■□□□□ 0.55
SMG6-220ENST00000576218 ATRNL1Q5VV63 1379 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 CETPP11597 493 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 PPIL2Q13356 520 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
SMG6-220ENST00000576218 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
SMG6-220ENST00000576218 SAP30BPQ9UHR5 308 aaKnown RBP18.46■□□□□ 0.55
SMG6-220ENST00000576218 COL2A1P02458 1487 aaPredicted RBP18.46■□□□□ 0.54
SMG6-220ENST00000576218 ERC2O15083 957 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 PPATQ06203 517 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 SCYL3Q8IZE3 742 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 CRNKL1Q9BZJ0 848 aaKnown RBP18.45■□□□□ 0.54
SMG6-220ENST00000576218 PI4KBQ9UBF8 816 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 ZNF112Q9UJU3 913 aa18.45■□□□□ 0.54
SMG6-220ENST00000576218 FAM196BA6NMK8 535 aa18.44■□□□□ 0.54
SMG6-220ENST00000576218 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
SMG6-220ENST00000576218 NOL9Q5SY16 702 aaKnown RBP18.44■□□□□ 0.54
SMG6-220ENST00000576218 HERC5Q9UII4 1024 aaKnown RBP18.44■□□□□ 0.54
SMG6-220ENST00000576218 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
SMG6-220ENST00000576218 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMG6-220ENST00000576218 IRF6O14896 467 aa18.43■□□□□ 0.54
SMG6-220ENST00000576218 CTNND1O60716 968 aaKnown RBP18.43■□□□□ 0.54
SMG6-220ENST00000576218 TBC1D12O60347 775 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 CAPN15O75808 1086 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 MX1P20591 662 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
SMG6-220ENST00000576218 TAF1CQ15572 869 aaPredicted RBP18.42■□□□□ 0.54
SMG6-220ENST00000576218 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
SMG6-220ENST00000576218 BRI3BPQ8WY22 251 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms