RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 NUDT12Q9BQG2 462 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
RAB40B-210ENST00000576148 DNM1LO00429 736 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 EPHB4P54760 987 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 CHRNDQ07001 517 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 HDGFL1Q5TGJ6 251 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 SLC39A5Q6ZMH5 540 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 PDLIM7Q9NR12 457 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 PICK1Q9NRD5 415 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 BABAM1Q9NWV8 329 aa9.35□□□□□ -0.91
RAB40B-210ENST00000576148 RPAP1Q9BWH6 1393 aaPredicted RBP9.35□□□□□ -0.91
RAB40B-210ENST00000576148 TRIM43BA6NCK2 446 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 SNAP23O00161 211 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 PER1O15534 1290 aaPredicted RBP9.34□□□□□ -0.91
RAB40B-210ENST00000576148 TLL1O43897 1013 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 TRIM60Q495X7 471 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 SOCS4Q8WXH5 440 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 HERVK_113Q902F9 699 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 LPAR1Q92633 364 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 TRIM43Q96BQ3 446 aaPredicted RBP9.34□□□□□ -0.91
RAB40B-210ENST00000576148 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 AFG3L2Q9Y4W6 797 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
RAB40B-210ENST00000576148 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.92
RAB40B-210ENST00000576148 LTBP2Q14767 1821 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 DOCK3Q8IZD9 2030 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 MSCO60682 206 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 TAF5LO75529 589 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
RAB40B-210ENST00000576148 PBX2P40425 430 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
RAB40B-210ENST00000576148 FPGSQ05932 587 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 TEKT1Q969V4 418 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 PBX4Q9BYU1 374 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 COG5Q9UP83 839 aa9.33□□□□□ -0.92
RAB40B-210ENST00000576148 ZDBF2Q9HCK1 2354 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 MAST2Q6P0Q8 1798 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 RAG1P15918 1043 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 PTPRAP18433 802 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 ARRDC4Q8NCT1 418 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 FAM151AQ8WW52 585 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 DDX20Q9UHI6 824 aaKnown RBP9.32□□□□□ -0.92
RAB40B-210ENST00000576148 MSRAQ9UJ68 235 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 CACNA1GO43497 2377 aa9.32□□□□□ -0.92
RAB40B-210ENST00000576148 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
RAB40B-210ENST00000576148 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 GRXCR1A8MXD5 290 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 ALADP13716 330 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 ITGA6P23229 1130 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 ITGB8P26012 769 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 CNGA1P29973 690 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 RGS2P41220 211 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
RAB40B-210ENST00000576148 RAB30Q15771 203 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 CCL14Q16627 93 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 GJC2Q5T442 439 aaPredicted RBP9.31□□□□□ -0.92
RAB40B-210ENST00000576148 MFSD14CQ5VZR4 134 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 SCYL3Q8IZE3 742 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
RAB40B-210ENST00000576148 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 TLE2Q04725 743 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 TCP10Q12799 353 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 SNX17Q15036 470 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 TREML2Q5T2D2 321 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 CCDC174Q6PII3 467 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
RAB40B-210ENST00000576148 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
RAB40B-210ENST00000576148 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 MORF4L1Q9UBU8 362 aa9.3□□□□□ -0.92
RAB40B-210ENST00000576148 KIAA0355O15063 1070 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 CLTBP09497 229 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 C1orf53Q5VUE5 145 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 APOBEC3HQ6NTF7 200 aaKnown RBP9.29□□□□□ -0.92
RAB40B-210ENST00000576148 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
RAB40B-210ENST00000576148 MRIQ9BWK5 157 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 CD320Q9NPF0 282 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 SPINK5Q9NQ38 1064 aaPredicted RBP9.29□□□□□ -0.92
RAB40B-210ENST00000576148 DAGLAQ9Y4D2 1042 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 MYO9BQ13459 2157 aa9.29□□□□□ -0.92
RAB40B-210ENST00000576148 PHF20L1A8MW92 1017 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 HOXB7P09629 217 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 MAPK4P31152 587 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 ADCYAP1R1P41586 468 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 GRIK5Q16478 980 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 GPRC5AQ8NFJ5 357 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 USP6NLQ92738 828 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 HLA-CQ95604 372 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 APBA2Q99767 749 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms