RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 DDX4Q9NQI0 724 aaKnown RBP29.36■■■□□ 2.29
LITAF-213ENST00000574701 MAGEB6P1A0A0J9YX57 407 aa29.35■■■□□ 2.29
LITAF-213ENST00000574701 UBE2Q2LH0YL09 131 aa29.35■■■□□ 2.29
LITAF-213ENST00000574701 VEGFBP49765 207 aa29.35■■■□□ 2.29
LITAF-213ENST00000574701 CYP4F22Q6NT55 531 aa29.35■■■□□ 2.29
LITAF-213ENST00000574701 ZNF157P51786 506 aaPredicted RBP29.34■■■□□ 2.29
LITAF-213ENST00000574701 MAP3K11Q16584 847 aa29.34■■■□□ 2.29
LITAF-213ENST00000574701 FZD1Q9UP38 647 aa29.34■■■□□ 2.29
LITAF-213ENST00000574701 WDR33Q9C0J8 1336 aaKnown RBP29.34■■■□□ 2.29
LITAF-213ENST00000574701 COL2A1P02458 1487 aaPredicted RBP29.34■■■□□ 2.29
LITAF-213ENST00000574701 TCRBV5S4A2TA0A5A2 114 aa29.33■■■□□ 2.29
LITAF-213ENST00000574701 UBE3CQ15386 1083 aa29.33■■■□□ 2.29
LITAF-213ENST00000574701 TGFBRAP1Q8WUH2 860 aa29.33■■■□□ 2.29
LITAF-213ENST00000574701 CSRNP1Q96S65 589 aa29.33■■■□□ 2.29
LITAF-213ENST00000574701 OSBPL5Q9H0X9 879 aaPredicted RBP29.33■■■□□ 2.29
LITAF-213ENST00000574701 ZFPM1Q8IX07 1006 aa29.32■■■□□ 2.28
LITAF-213ENST00000574701 CCDC102AQ96A19 550 aa29.32■■■□□ 2.28
LITAF-213ENST00000574701 FSD1Q9BTV5 496 aa29.32■■■□□ 2.28
LITAF-213ENST00000574701 OTOFQ9HC10 1997 aa29.32■■■□□ 2.28
LITAF-213ENST00000574701 FLT1P17948 1338 aa29.31■■■□□ 2.28
LITAF-213ENST00000574701 USP2O75604 605 aaPredicted RBP29.31■■■□□ 2.28
LITAF-213ENST00000574701 ZFYP08048 801 aaPredicted RBP29.31■■■□□ 2.28
LITAF-213ENST00000574701 USP5P45974 858 aa29.31■■■□□ 2.28
LITAF-213ENST00000574701 MAPKAPK5Q8IW41 473 aa29.31■■■□□ 2.28
LITAF-213ENST00000574701 RIOK1Q9BRS2 568 aaKnown RBP29.31■■■□□ 2.28
LITAF-213ENST00000574701 THSD7BQ9C0I4 1608 aa29.31■■■□□ 2.28
LITAF-213ENST00000574701 ATRNL1Q5VV63 1379 aa29.3■■■□□ 2.28
LITAF-213ENST00000574701 UNCXA6NJT0 531 aa29.3■■■□□ 2.28
LITAF-213ENST00000574701 PLEKHM2Q8IWE5 1019 aa29.3■■■□□ 2.28
LITAF-213ENST00000574701 ANKRD13AQ8IZ07 590 aa29.3■■■□□ 2.28
LITAF-213ENST00000574701 ZNF341Q9BYN7 854 aa29.3■■■□□ 2.28
LITAF-213ENST00000574701 CRNKL1Q9BZJ0 848 aaKnown RBP29.3■■■□□ 2.28
LITAF-213ENST00000574701 LDLRAD1Q5T700 205 aa29.29■■■□□ 2.28
LITAF-213ENST00000574701 EVI5LQ96CN4 794 aa29.29■■■□□ 2.28
LITAF-213ENST00000574701 NAV1Q8NEY1 1877 aa29.29■■■□□ 2.28
LITAF-213ENST00000574701 DDTLA6NHG4 134 aaPredicted RBP29.28■■■□□ 2.28
LITAF-213ENST00000574701 SLC10A3P09131 477 aa29.28■■■□□ 2.28
LITAF-213ENST00000574701 MIGA2Q7L4E1 593 aa29.28■■■□□ 2.28
LITAF-213ENST00000574701 RASAL3Q86YV0 1011 aa29.28■■■□□ 2.28
LITAF-213ENST00000574701 DHX36Q9H2U1 1008 aaKnown RBP29.28■■■□□ 2.28
LITAF-213ENST00000574701 OSBPL3Q9H4L5 887 aa29.28■■■□□ 2.28
LITAF-213ENST00000574701 RNF113AO15541 343 aaKnown RBP29.27■■■□□ 2.28
LITAF-213ENST00000574701 MBD4O95243 580 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 NOGQ13253 232 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 CENPQQ7L2Z9 268 aaPredicted RBP29.27■■■□□ 2.28
LITAF-213ENST00000574701 SH3BP5LQ7L8J4 393 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 LCORLQ8N3X6 602 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 AIDAQ96BJ3 306 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 WRNIP1Q96S55 665 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.27■■■□□ 2.28
LITAF-213ENST00000574701 CSADQ9Y600 493 aa29.27■■■□□ 2.28
LITAF-213ENST00000574701 MYH1P12882 1939 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 TRIM6-TRIM34B2RNG4 842 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 SLFNL1Q499Z3 407 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 JMYQ8N9B5 988 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 APPBP2Q92624 585 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 CCDC136Q96JN2 1154 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 ARMT1Q9H993 441 aa29.26■■■□□ 2.27
LITAF-213ENST00000574701 MAP3K9P80192 1104 aa29.25■■■□□ 2.27
LITAF-213ENST00000574701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.25■■■□□ 2.27
LITAF-213ENST00000574701 FAM155AB1AL88 458 aaPredicted RBP29.24■■■□□ 2.27
LITAF-213ENST00000574701 CHGBP05060 677 aa29.24■■■□□ 2.27
LITAF-213ENST00000574701 HLA-DOAP06340 250 aa29.24■■■□□ 2.27
LITAF-213ENST00000574701 SLC10A4Q96EP9 437 aa29.24■■■□□ 2.27
LITAF-213ENST00000574701 AOC2O75106 756 aa29.23■■■□□ 2.27
LITAF-213ENST00000574701 PDE4AP27815 886 aa29.23■■■□□ 2.27
LITAF-213ENST00000574701 MAP2K2P36507 400 aa29.23■■■□□ 2.27
LITAF-213ENST00000574701 SAP30BPQ9UHR5 308 aaKnown RBP29.23■■■□□ 2.27
LITAF-213ENST00000574701 RILPL2Q969X0 211 aa29.22■■■□□ 2.27
LITAF-213ENST00000574701 CLMNQ96JQ2 1002 aa29.22■■■□□ 2.27
LITAF-213ENST00000574701 TRIM34Q9BYJ4 488 aa29.22■■■□□ 2.27
LITAF-213ENST00000574701 PUS7LQ9H0K6 701 aaKnown RBP29.22■■■□□ 2.27
LITAF-213ENST00000574701 PI4KBQ9UBF8 816 aa29.22■■■□□ 2.27
LITAF-213ENST00000574701 DDX60LQ5H9U9 1706 aaKnown RBP29.22■■■□□ 2.27
LITAF-213ENST00000574701 VGLL4Q14135 290 aa29.21■■■□□ 2.27
LITAF-213ENST00000574701 DDRGK1Q96HY6 314 aa29.21■■■□□ 2.27
LITAF-213ENST00000574701 ELP3Q9H9T3 547 aa29.21■■■□□ 2.27
LITAF-213ENST00000574701 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.21■■■□□ 2.273e-7■■■□□ 18
LITAF-213ENST00000574701 PALD1Q9ULE6 856 aa29.21■■■□□ 2.27
LITAF-213ENST00000574701 TBC1D12O60347 775 aa29.2■■■□□ 2.26
LITAF-213ENST00000574701 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.2■■■□□ 2.26
LITAF-213ENST00000574701 CRACR2BQ8N4Y2 399 aaPredicted RBP29.2■■■□□ 2.26
LITAF-213ENST00000574701 SDR42E1Q8WUS8 393 aa29.2■■■□□ 2.26
LITAF-213ENST00000574701 HERC5Q9UII4 1024 aaKnown RBP29.2■■■□□ 2.26
LITAF-213ENST00000574701 SIPA1L1O43166 1804 aa29.2■■■□□ 2.26
LITAF-213ENST00000574701 OSBP2Q969R2 916 aa29.19■■■□□ 2.26
LITAF-213ENST00000574701 WNK4Q96J92 1243 aa29.19■■■□□ 2.26
LITAF-213ENST00000574701 ZNF112Q9UJU3 913 aa29.19■■■□□ 2.26
LITAF-213ENST00000574701 SLC4A4Q9Y6R1 1079 aa29.19■■■□□ 2.26
LITAF-213ENST00000574701 CEP350Q5VT06 3117 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 POLR3DP05423 398 aaPredicted RBP29.18■■■□□ 2.26
LITAF-213ENST00000574701 MAP2K1Q02750 393 aaPredicted RBP29.18■■■□□ 2.26
LITAF-213ENST00000574701 MKRN3Q13064 507 aaKnown RBP29.18■■■□□ 2.26
LITAF-213ENST00000574701 SLC4A8Q2Y0W8 1093 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 ERICH6BQ5W0A0 696 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 TTC6Q86TZ1 520 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 TICAM2Q86XR7 235 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 ATP8A2Q9NTI2 1148 aa29.18■■■□□ 2.26
LITAF-213ENST00000574701 GPAA1O43292 621 aa29.17■■■□□ 2.26
LITAF-213ENST00000574701 ZBTB48P10074 688 aaPredicted RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms