RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 USP40Q9NVE5 1235 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 ZNF445P59923 1031 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 ANP32BQ92688 251 aaKnown RBP18.88■□□□□ 0.61
SMPD3-212ENST00000574662 CRNKL1Q9BZJ0 848 aaKnown RBP18.88■□□□□ 0.61
SMPD3-212ENST00000574662 DLGAP5Q15398 846 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 MCTP1Q6DN14 999 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 TEX11Q8IYF3 940 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-212ENST00000574662 TDRD3Q9H7E2 651 aaKnown RBP18.88■□□□□ 0.61
SMPD3-212ENST00000574662 MYOZ2Q9NPC6 264 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
SMPD3-212ENST00000574662 SPDYE2BA6NHP3 402 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 SPDYE6P0CI01 402 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 HSPA4P34932 840 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 ALX1Q15699 326 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 RBM26Q5T8P6 1007 aaKnown RBP18.87■□□□□ 0.61
SMPD3-212ENST00000574662 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 GPRC5DQ9NZD1 345 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
SMPD3-212ENST00000574662 TAF6LQ9Y6J9 622 aa18.87■□□□□ 0.61
SMPD3-212ENST00000574662 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-212ENST00000574662 WDHD1O75717 1129 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-212ENST00000574662 PLCG2P16885 1265 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 EPS15P42566 896 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 CACNB3P54284 484 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 RASEFQ8IZ41 740 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-212ENST00000574662 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 TBC1D10BQ4KMP7 808 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-212ENST00000574662 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 MAPKAPK5Q8IW41 473 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 DDX4Q9NQI0 724 aaKnown RBP18.86■□□□□ 0.61
SMPD3-212ENST00000574662 LMBRD1Q9NUN5 540 aa18.86■□□□□ 0.61
SMPD3-212ENST00000574662 RPAP1Q9BWH6 1393 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-212ENST00000574662 ESPNB1AK53 854 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 SMIM22K7EJ46 135 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 WNT10BO00744 389 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 SLC27A2O14975 620 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 USP5P45974 858 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-212ENST00000574662 MMP14P50281 582 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 NFIAQ12857 509 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 KCNB2Q92953 911 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 ATP8A2Q9NTI2 1148 aa18.85■□□□□ 0.61
SMPD3-212ENST00000574662 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
SMPD3-212ENST00000574662 GLTPD2A6NH11 291 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 H7C1D1 291 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 CYP21A2P08686 494 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 PPP1R9BQ96SB3 815 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 NAPBQ9H115 298 aa18.84■□□□□ 0.61
SMPD3-212ENST00000574662 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 TDO2P48775 406 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 HAND2P61296 217 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 EVX2Q03828 476 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 GIMAP6Q6P9H5 292 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 CTR9Q6PD62 1173 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 ZFPM1Q8IX07 1006 aa18.83■□□□□ 0.61
SMPD3-212ENST00000574662 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.61
SMPD3-212ENST00000574662 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 USP17L12C9JPN9 530 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 USP17L21D6R901 530 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 PICALMQ13492 652 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 TRPM4Q8TD43 1214 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
SMPD3-212ENST00000574662 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.6
SMPD3-212ENST00000574662 ASTN2O75129 1339 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-212ENST00000574662 FLT1P17948 1338 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 CYP2D6P10635 497 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 NEK4P51957 841 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 HIRAP54198 1017 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-212ENST00000574662 CUL4AQ13619 759 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 L3MBTL3Q96JM7 780 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-212ENST00000574662 IDI2Q9BXS1 227 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
SMPD3-212ENST00000574662 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
SMPD3-212ENST00000574662 ZMYM6O95789 1325 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 KIF4BQ2VIQ3 1234 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 ZNF784Q8NCA9 323 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-212ENST00000574662 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 MCM9Q9NXL9 1143 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 TACC3Q9Y6A5 838 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 MINDY4BA8MYZ0 360 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-212ENST00000574662 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 ZSCAN23Q3MJ62 389 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 INCENPQ9NQS7 918 aa18.81■□□□□ 0.6
SMPD3-212ENST00000574662 CDK5RAP2Q96SN8 1893 aa18.8■□□□□ 0.6
SMPD3-212ENST00000574662 POTECB2RU33 542 aa18.8■□□□□ 0.6
SMPD3-212ENST00000574662 ZNF213O14771 459 aa18.8■□□□□ 0.6
SMPD3-212ENST00000574662 MBD3O95983 291 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms