RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 ERO1BQ86YB8 467 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-214ENST00000574003 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-214ENST00000574003 GPR108Q9NPR9 543 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
RPAIN-214ENST00000574003 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 ZNF112Q9UJU3 913 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
RPAIN-214ENST00000574003 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-214ENST00000574003 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-214ENST00000574003 GTF2A2P52657 109 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 CCDC84Q86UT8 332 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-214ENST00000574003 SIRT2Q8IXJ6 389 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-214ENST00000574003 CD99L2Q8TCZ2 262 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 DOCK2Q92608 1830 aa13.91□□□□□ -0.18
RPAIN-214ENST00000574003 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 ENTPD3O75355 529 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 PPIL2Q13356 520 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-214ENST00000574003 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
RPAIN-214ENST00000574003 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-214ENST00000574003 HOOK2Q96ED9 719 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
RPAIN-214ENST00000574003 PHF20L1A8MW92 1017 aa13.89□□□□□ -0.19
RPAIN-214ENST00000574003 AACSQ86V21 672 aa13.89□□□□□ -0.19
RPAIN-214ENST00000574003 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
RPAIN-214ENST00000574003 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPAIN-214ENST00000574003 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
RPAIN-214ENST00000574003 LDHCP07864 332 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 CETPP11597 493 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
RPAIN-214ENST00000574003 GSTO1P78417 241 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 PPATQ06203 517 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 NAA16Q6N069 864 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-214ENST00000574003 OTOP1Q7RTM1 612 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 DDX19BQ9UMR2 479 aa13.88□□□□□ -0.19
RPAIN-214ENST00000574003 SP3Q02447 781 aa13.87□□□□□ -0.19
RPAIN-214ENST00000574003 MOGSQ13724 837 aa13.87□□□□□ -0.19
RPAIN-214ENST00000574003 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
RPAIN-214ENST00000574003 SLC4A8Q2Y0W8 1093 aa13.87□□□□□ -0.19
RPAIN-214ENST00000574003 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
RPAIN-214ENST00000574003 FBXO46Q6PJ61 603 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-214ENST00000574003 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
RPAIN-214ENST00000574003 ZFYVE28Q9HCC9 887 aa13.87□□□□□ -0.19
RPAIN-214ENST00000574003 MS4A1P11836 297 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 CYP7A1P22680 504 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 RGS19P49795 217 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
RPAIN-214ENST00000574003 MAPKAPK5Q8IW41 473 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 ZNF512BQ96KM6 892 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-214ENST00000574003 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-214ENST00000574003 KCNH4Q9UQ05 1017 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 ZHX2Q9Y6X8 837 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
RPAIN-214ENST00000574003 IDH1O75874 414 aaKnown RBP13.85□□□□□ -0.19
RPAIN-214ENST00000574003 PTPRAP18433 802 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-214ENST00000574003 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
RPAIN-214ENST00000574003 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 MAST2Q6P0Q8 1798 aa13.85□□□□□ -0.19
RPAIN-214ENST00000574003 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
RPAIN-214ENST00000574003 HTTP42858 3142 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 PDHXO00330 501 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 MLLT1Q03111 559 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-214ENST00000574003 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-214ENST00000574003 MAGEB6Q8N7X4 407 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 EDC3Q96F86 508 aaKnown RBP13.84□□□□□ -0.19
RPAIN-214ENST00000574003 EFCC1Q9HA90 598 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.192e-7■■□□□ 11.6
RPAIN-214ENST00000574003 PICK1Q9NRD5 415 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
RPAIN-214ENST00000574003 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 TLR2O60603 784 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
RPAIN-214ENST00000574003 CYP2C8P10632 490 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 CTGFP29279 349 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 PPP4CP60510 307 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 GADL1Q6ZQY3 521 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 ANKRD23Q86SG2 305 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
RPAIN-214ENST00000574003 PALD1Q9ULE6 856 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 PTPN22Q9Y2R2 807 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms