RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
TRAPPC1-206ENST00000573989 MYH1P12882 1939 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 TCRBV5S4A2TA0A5A2 114 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 RNF113AO15541 343 aaKnown RBP15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 USP5P45974 858 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 PRKG1Q13976 671 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 TGFBRAP1Q8WUH2 860 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 AIDAQ96BJ3 306 aa15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 DHX36Q9H2U1 1008 aaKnown RBP15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
TRAPPC1-206ENST00000573989 RFX7Q2KHR2 1363 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 RGMBQ6NW40 437 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 COL2A1P02458 1487 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC1-206ENST00000573989 ZNF157P51786 506 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 MAPKAPK5Q8IW41 473 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 APPBP2Q92624 585 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 CCDC102AQ96A19 550 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 RIOK1Q9BRS2 568 aaKnown RBP15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 FLT1P17948 1338 aa15.37■□□□□ 0.05
TRAPPC1-206ENST00000573989 ATRNL1Q5VV63 1379 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 SSC5DA1L4H1 1573 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 USP2O75604 605 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 MBD4O95243 580 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 HLA-DOAP06340 250 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 ANKRD13AQ8IZ07 590 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
TRAPPC1-206ENST00000573989 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 MAP3K9P80192 1104 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 LCORLQ8N3X6 602 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 SLC10A4Q96EP9 437 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 ARMT1Q9H993 441 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 ATP8A2Q9NTI2 1148 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 PI4KBQ9UBF8 816 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 CSADQ9Y600 493 aa15.35■□□□□ 0.05
TRAPPC1-206ENST00000573989 DDTLA6NHG4 134 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 HIP1O00291 1037 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 GNAT2P19087 354 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 PDE4AP27815 886 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 GRM1Q13255 1194 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 CYP4F22Q6NT55 531 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 MOB2Q70IA6 237 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 WRNIP1Q96S55 665 aa15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 PUS7LQ9H0K6 701 aaKnown RBP15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
TRAPPC1-206ENST00000573989 OTOFQ9HC10 1997 aa15.33■□□□□ 0.05
TRAPPC1-206ENST00000573989 TBC1D12O60347 775 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 VEGFBP49765 207 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 NOGQ13253 232 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 ZMYM1Q5SVZ6 1142 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 CRACR2BQ8N4Y2 399 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 OSBP2Q969R2 916 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 PALD1Q9ULE6 856 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 FZD1Q9UP38 647 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 SLC4A4Q9Y6R1 1079 aa15.33■□□□□ 0.04
TRAPPC1-206ENST00000573989 GPAA1O43292 621 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 MAP2K2P36507 400 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 MAP3K10Q02779 954 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 SLFNL1Q499Z3 407 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 SH3BP5LQ7L8J4 393 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 SAP30BPQ9UHR5 308 aaKnown RBP15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
TRAPPC1-206ENST00000573989 CHGBP05060 677 aa15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 SLC10A3P09131 477 aa15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 NACAP1Q9BZK3 213 aa15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 DCP1AQ9NPI6 582 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC1-206ENST00000573989 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms