RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DDX4Q9NQI0 724 aaKnown RBP15.56■□□□□ 0.08
NPLOC4-213ENST00000573519 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
NPLOC4-213ENST00000573519 LAMB1P07942 1786 aa15.56■□□□□ 0.08
NPLOC4-213ENST00000573519 RFX7Q2KHR2 1363 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 CETPP11597 493 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 ZAP70P43403 619 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 PPIL2Q13356 520 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 SNAPC2Q13487 334 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 NAA16Q6N069 864 aaPredicted RBP15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 SH3BP5LQ7L8J4 393 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 AACSQ86V21 672 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 AK9Q5TCS8 1911 aa15.55■□□□□ 0.08
NPLOC4-213ENST00000573519 DDTLA6NHG4 134 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 HMMRO75330 724 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 RHBDL3P58872 404 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 PPATQ06203 517 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 TAF1CQ15572 869 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 PKN2Q16513 984 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 RPAP2Q8IXW5 612 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 IL1RAPL2Q9NP60 686 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
NPLOC4-213ENST00000573519 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 ZNF512BQ96KM6 892 aaPredicted RBP15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 ZFYVE28Q9HCC9 887 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 PICK1Q9NRD5 415 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 HPS5Q9UPZ3 1129 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 TRIM17Q9Y577 477 aa15.53■□□□□ 0.08
NPLOC4-213ENST00000573519 ATRNL1Q5VV63 1379 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 BAG3O95817 575 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 SLURP2P0DP57 97 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 NOL9Q5SY16 702 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 ERO1AQ96HE7 468 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 PIH1D3Q9NQM4 214 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
NPLOC4-213ENST00000573519 MAST2Q6P0Q8 1798 aa15.52■□□□□ 0.07
NPLOC4-213ENST00000573519 BTBD19C9JJ37 291 aa15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 IDH1O75874 414 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 MAP4K4O95819 1239 aaPredicted RBP15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 SOX10P56693 466 aa15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 SP3Q02447 781 aa15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 SCYL3Q8IZE3 742 aa15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 OSBPL5Q9H0X9 879 aaPredicted RBP15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.51■□□□□ 0.07
NPLOC4-213ENST00000573519 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 PHF20L1A8MW92 1017 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 ADGRA1Q86SQ6 560 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 SIRT2Q8IXJ6 389 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 CLASRPQ8N2M8 674 aaKnown RBP15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
NPLOC4-213ENST00000573519 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 IFIT2P09913 472 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 PLCG2P16885 1265 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 CYP7A1P22680 504 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 OTOP1Q7RTM1 612 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 TGFBRAP1Q8WUH2 860 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 ANTXR1Q9H6X2 564 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 KCNH4Q9UQ05 1017 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 ZHX2Q9Y6X8 837 aa15.49■□□□□ 0.07
NPLOC4-213ENST00000573519 PDHXO00330 501 aa15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 PTPRAP18433 802 aa15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 MAP3K10Q02779 954 aa15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 MAGEB6Q8N7X4 407 aa15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 EFCC1Q9HA90 598 aa15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 ZCCHC17Q9NP64 241 aaKnown RBP15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-213ENST00000573519 TLR2O60603 784 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 RAB11FIP3O75154 756 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 ECM2O94769 699 aaPredicted RBP15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 PPP4CP60510 307 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 MAP3K12Q12852 859 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 ANKRD23Q86SG2 305 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
NPLOC4-213ENST00000573519 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 FLT1P17948 1338 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 CXCL11O14625 94 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 TBC1D12O60347 775 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 IGSF3O75054 1194 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 SLC4A8Q2Y0W8 1093 aa15.46■□□□□ 0.07
NPLOC4-213ENST00000573519 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms