RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 USP42Q9H9J4 1324 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-205ENST00000573209 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-205ENST00000573209 STRCQ7RTU9 1775 aa11.93□□□□□ -0.5
CHRNB1-205ENST00000573209 HOXB7P09629 217 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 BRD3Q15059 726 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 CAPRIN2Q6IMN6 1127 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 TRIM4Q9C037 500 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 TMEM98Q9Y2Y6 226 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 EID1Q9Y6B2 187 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 PHLPP2Q6ZVD8 1323 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 KIF5CO60282 957 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 GADD45BO75293 160 aaPredicted RBP11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 HOXC9P31274 260 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 RBM26Q5T8P6 1007 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 CCDC80Q76M96 950 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 ARL10Q8N8L6 244 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 NRBP1Q9UHY1 535 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 TBX22Q9Y458 520 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
CHRNB1-205ENST00000573209 F8VZ95 297 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 PSMC1P62191 440 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 KLHL10Q6JEL2 608 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 LSM14AQ8ND56 463 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 PI4K2BQ8TCG2 481 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 HOOK2Q96ED9 719 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 TRPV5Q9NQA5 729 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 KLC4Q9NSK0 619 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 ERICH2A1L162 156 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 TRPC1P48995 793 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 EVCP57679 992 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 UBE2HP62256 183 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 LRRFIP1Q32MZ4 808 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 HDXQ7Z353 690 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 ANKLE2Q86XL3 938 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 CHAMP1Q96JM3 812 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 TRIM5Q9C035 493 aa11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 DDX20Q9UHI6 824 aaKnown RBP11.91□□□□□ -0.5
CHRNB1-205ENST00000573209 CAPN15O75808 1086 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 FERP16591 822 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 SLC8A1P32418 973 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 PAPOLAP51003 745 aaKnown RBP11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ARMC9Q7Z3E5 817 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 FAM81BQ96LP2 452 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 TTC14Q96N46 770 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 PCDHGC5Q9Y5F6 944 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ZNF142P52746 1687 aaPredicted RBP11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
CHRNB1-205ENST00000573209 CYP11B2P19099 503 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 SMTNP53814 917 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 MPP3Q13368 585 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 RBM41Q96IZ5 413 aaKnown RBP11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 THRAP3Q9Y2W1 955 aaKnown RBP11.9□□□□□ -0.51
CHRNB1-205ENST00000573209 ZEB2O60315 1214 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 PHACTR1Q9C0D0 580 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 LSG1Q9H089 658 aaKnown RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 NFAT5O94916 1531 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 MYO1FO00160 1098 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 KIAA0754O94854 1291 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 ZSCAN22P10073 491 aaPredicted RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 ARHGAP25P42331 645 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 NLRP6P59044 892 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 SNCBQ16143 134 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
CHRNB1-205ENST00000573209 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms