RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
SMIM28-201ENST00000573100 PHF20L1A8MW92 1017 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 PTPRAP18433 802 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 GADL1Q6ZQY3 521 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 ZFPM1Q8IX07 1006 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.05
SMIM28-201ENST00000573100 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
SMIM28-201ENST00000573100 SLC5A1P13866 664 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 BMP8BP34820 402 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 LPIN2Q92539 896 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 COA7Q96BR5 231 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 GDF15Q99988 308 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
SMIM28-201ENST00000573100 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
SMIM28-201ENST00000573100 DEFB123Q8N688 67 aa15.37■□□□□ 0.05
SMIM28-201ENST00000573100 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
SMIM28-201ENST00000573100 LRRFIP2Q9Y608 721 aaKnown RBP15.37■□□□□ 0.05
SMIM28-201ENST00000573100 EYA2O00167 538 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 PRDX5P30044 214 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 RGS3P49796 1198 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 C7orf61Q8IZ16 206 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
SMIM28-201ENST00000573100 DIS3LQ8TF46 1054 aaKnown RBP15.36■□□□□ 0.05
SMIM28-201ENST00000573100 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMIM28-201ENST00000573100 GNL3LQ9NVN8 582 aaKnown RBP15.36■□□□□ 0.05
SMIM28-201ENST00000573100 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
SMIM28-201ENST00000573100 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
SMIM28-201ENST00000573100 CTNND1O60716 968 aaKnown RBP15.35■□□□□ 0.05
SMIM28-201ENST00000573100 ENTPD3O75355 529 aa15.35■□□□□ 0.05
SMIM28-201ENST00000573100 MAP3K10Q02779 954 aa15.35■□□□□ 0.05
SMIM28-201ENST00000573100 ZSCAN29Q8IWY8 852 aaPredicted RBP15.35■□□□□ 0.05
SMIM28-201ENST00000573100 IDI2Q9BXS1 227 aa15.35■□□□□ 0.05
SMIM28-201ENST00000573100 MGAMO43451 1857 aa15.35■□□□□ 0.05
SMIM28-201ENST00000573100 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
SMIM28-201ENST00000573100 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
SMIM28-201ENST00000573100 STXBP5LQ9Y2K9 1186 aa15.34■□□□□ 0.05
SMIM28-201ENST00000573100 ATRNL1Q5VV63 1379 aa15.34■□□□□ 0.05
SMIM28-201ENST00000573100 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 LRIT3Q3SXY7 679 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 Q7L0L9 218 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 USP44Q9H0E7 712 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 DOCK3Q8IZD9 2030 aa15.33■□□□□ 0.04
SMIM28-201ENST00000573100 HMGCRP04035 888 aa15.32■□□□□ 0.04
SMIM28-201ENST00000573100 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
SMIM28-201ENST00000573100 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
SMIM28-201ENST00000573100 RPTORQ8N122 1335 aa15.32■□□□□ 0.04
SMIM28-201ENST00000573100 SALL1Q9NSC2 1324 aa15.32■□□□□ 0.04
SMIM28-201ENST00000573100 DDTLA6NHG4 134 aaPredicted RBP15.31■□□□□ 0.04
SMIM28-201ENST00000573100 SEMA3EO15041 775 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 SLURP2P0DP57 97 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 SYN1P17600 705 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 MAGEA10P43363 369 aaPredicted RBP15.31■□□□□ 0.04
SMIM28-201ENST00000573100 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
SMIM28-201ENST00000573100 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
SMIM28-201ENST00000573100 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 TREML2Q5T2D2 321 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 ATG9AQ7Z3C6 839 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 TDHQ8IZJ6 230 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
SMIM28-201ENST00000573100 CCDC84Q86UT8 332 aaPredicted RBP15.3■□□□□ 0.04
SMIM28-201ENST00000573100 SLF2Q8IX21 1173 aa15.3■□□□□ 0.04
SMIM28-201ENST00000573100 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
SMIM28-201ENST00000573100 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
SMIM28-201ENST00000573100 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.3■□□□□ 0.04
SMIM28-201ENST00000573100 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
SMIM28-201ENST00000573100 UNC80Q8N2C7 3258 aa15.3■□□□□ 0.04
SMIM28-201ENST00000573100 GAKO14976 1311 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 PHKA1P46020 1223 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 TRIM32Q13049 653 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 SPP2Q13103 211 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 PABPC4Q13310 644 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMIM28-201ENST00000573100 PICALMQ13492 652 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 DZIP1Q86YF9 867 aaKnown RBP15.29■□□□□ 0.04
SMIM28-201ENST00000573100 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
SMIM28-201ENST00000573100 PROCA1Q8NCQ7 364 aaPredicted RBP15.29■□□□□ 0.04
SMIM28-201ENST00000573100 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
SMIM28-201ENST00000573100 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 OGDHLQ9ULD0 1010 aa15.29■□□□□ 0.04
SMIM28-201ENST00000573100 PTPRCP08575 1304 aa15.28■□□□□ 0.04
SMIM28-201ENST00000573100 TBC1D12O60347 775 aa15.28■□□□□ 0.04
SMIM28-201ENST00000573100 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
SMIM28-201ENST00000573100 SIL1Q9H173 461 aa15.28■□□□□ 0.04
SMIM28-201ENST00000573100 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
SMIM28-201ENST00000573100 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
SMIM28-201ENST00000573100 CIAO1O76071 339 aa15.27■□□□□ 0.04
SMIM28-201ENST00000573100 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
SMIM28-201ENST00000573100 ASCC2Q9H1I8 757 aaPredicted RBP15.27■□□□□ 0.04
SMIM28-201ENST00000573100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMIM28-201ENST00000573100 ALPK3Q96L96 1907 aa15.27■□□□□ 0.03
SMIM28-201ENST00000573100 RFX7Q2KHR2 1363 aa15.26■□□□□ 0.03
SMIM28-201ENST00000573100 ZBTB22O15209 634 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms