RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 ANO2Q9NQ90 1003 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 CHD4Q14839 1912 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 PATL2C9JE40 543 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 KIF3CO14782 793 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 SGSM2O43147 1006 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 FAM151AQ8WW52 585 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 GLIS2Q9BZE0 524 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 TMEM39BQ9GZU3 492 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 OSBPL5Q9H0X9 879 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 NAPBQ9H115 298 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 DCP1AQ9NPI6 582 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 MCM9Q9NXL9 1143 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 AKAP11Q9UKA4 1901 aa11.29□□□□□ -0.6
NPLOC4-208ENST00000572351 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 TOMM70O94826 608 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 SLC4A8Q2Y0W8 1093 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 DHX36Q9H2U1 1008 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 PSME4Q14997 1843 aa11.28□□□□□ -0.6
NPLOC4-208ENST00000572351 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
NPLOC4-208ENST00000572351 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 MINDY4BA8MYZ0 360 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 REC8O95072 547 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 NF2P35240 595 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 TTC6Q86TZ1 520 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 IFNL3Q8IZI9 196 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 IL25Q9H293 177 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 PALD1Q9ULE6 856 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 CNTNAP1P78357 1384 aa11.27□□□□□ -0.61
NPLOC4-208ENST00000572351 USP17L12C9JPN9 530 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 USP17L21D6R901 530 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 PI4KBQ9UBF8 816 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
NPLOC4-208ENST00000572351 SCN4AP35499 1836 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 TRAF5O00463 557 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 FGAP02671 866 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 CYP2D6P10635 497 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 IMMTQ16891 758 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 DCAF15Q66K64 600 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 DLK2Q6UY11 383 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
NPLOC4-208ENST00000572351 ADAMTSL1Q8N6G6 1762 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 ZNF213O14771 459 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 FOXP2O15409 715 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 PTH1RQ03431 593 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 PPARAQ07869 468 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 FSTL1Q12841 308 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 PRKG1Q13976 671 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 ALX1Q15699 326 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 C12orf60Q5U649 245 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 MIGA2Q7L4E1 593 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 STK11IPQ8N1F8 1099 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
NPLOC4-208ENST00000572351 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 735.4 ms