RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 TEX11Q8IYF3 940 aa24.55■■□□□ 1.52
NUP88-204ENST00000572290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.55■■□□□ 1.52
NUP88-204ENST00000572290 CNKSR2Q8WXI2 1034 aa24.55■■□□□ 1.52
NUP88-204ENST00000572290 AATFQ9NY61 560 aaKnown RBP eCLIP24.55■■□□□ 1.52
NUP88-204ENST00000572290 ZNF112Q9UJU3 913 aa24.55■■□□□ 1.52
NUP88-204ENST00000572290 DDTLA6NHG4 134 aaPredicted RBP24.54■■□□□ 1.52
NUP88-204ENST00000572290 SPDYE5A6NIY4 337 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 PPP4CP60510 307 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 ADGRA1Q86SQ6 560 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 SH3RF3Q8TEJ3 882 aaPredicted RBP24.54■■□□□ 1.52
NUP88-204ENST00000572290 OTUD5Q96G74 571 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 DCTPP1Q9H773 170 aa24.54■■□□□ 1.52
NUP88-204ENST00000572290 TBC1D8O95759 1140 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 PLCG2P16885 1265 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 CYP7A1P22680 504 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 INPP5BP32019 993 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 MAP3K12Q12852 859 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 TTF1Q15361 905 aaPredicted RBP24.53■■□□□ 1.52
NUP88-204ENST00000572290 ERO1BQ86YB8 467 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 IFNL1Q8IU54 200 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 PCDHB15Q9Y5E8 787 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 ATRNL1Q5VV63 1379 aa24.53■■□□□ 1.52
NUP88-204ENST00000572290 TESPA1A2RU30 521 aaPredicted RBP24.52■■□□□ 1.52
NUP88-204ENST00000572290 SMARCA5O60264 1052 aaPredicted RBP24.52■■□□□ 1.52
NUP88-204ENST00000572290 OSBPL5Q9H0X9 879 aaPredicted RBP24.52■■□□□ 1.52
NUP88-204ENST00000572290 IGF2BP3O00425 579 aaKnown RBP eCLIP24.51■■□□□ 1.51
NUP88-204ENST00000572290 GTF2A2P52657 109 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 OTUD7BQ6GQQ9 843 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 TMED8Q6PL24 325 aaPredicted RBP24.51■■□□□ 1.51
NUP88-204ENST00000572290 MAGEB6Q8N7X4 407 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 MS4A4AQ96JQ5 239 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 DNAJC2Q99543 621 aaKnown RBP24.51■■□□□ 1.51
NUP88-204ENST00000572290 CFHR5Q9BXR6 569 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 MYH2Q9UKX2 1941 aa24.51■■□□□ 1.51
NUP88-204ENST00000572290 MAP3K10Q02779 954 aa24.5■■□□□ 1.51
NUP88-204ENST00000572290 NOL9Q5SY16 702 aaKnown RBP24.5■■□□□ 1.51
NUP88-204ENST00000572290 ATP5JP18859 108 aa24.49■■□□□ 1.51
NUP88-204ENST00000572290 PPATQ06203 517 aa24.49■■□□□ 1.51
NUP88-204ENST00000572290 PPIL2Q13356 520 aa24.49■■□□□ 1.51
NUP88-204ENST00000572290 CCL15-CCL14A0A0B4J2E2 113 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 PHF20L1A8MW92 1017 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 GOLIM4O00461 696 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 DYNLL1P63167 89 aaKnown RBP24.48■■□□□ 1.51
NUP88-204ENST00000572290 CCL15Q16663 113 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 TGFBRAP1Q8WUH2 860 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 PTPN18Q99952 460 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 BOLA2Q9H3K6 86 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 AKAP11Q9UKA4 1901 aa24.48■■□□□ 1.51
NUP88-204ENST00000572290 COL2A1P02458 1487 aaPredicted RBP24.47■■□□□ 1.51
NUP88-204ENST00000572290 IRF6O14896 467 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 TBC1D12O60347 775 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 SLURP2P0DP57 97 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
NUP88-204ENST00000572290 CERS3Q8IU89 383 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 MAPKAPK5Q8IW41 473 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 MIGA1Q8NAN2 632 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 OTOFQ9HC10 1997 aa24.47■■□□□ 1.51
NUP88-204ENST00000572290 GPR25O00155 361 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 SCYL3Q8IZE3 742 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 R3HDMLQ9H3Y0 253 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 PAG1Q9NWQ8 432 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 MAST2Q6P0Q8 1798 aa24.46■■□□□ 1.51
NUP88-204ENST00000572290 FLT1P17948 1338 aa24.45■■□□□ 1.5
NUP88-204ENST00000572290 CETPP11597 493 aa24.45■■□□□ 1.5
NUP88-204ENST00000572290 SLC9C2Q5TAH2 1124 aa24.45■■□□□ 1.5
NUP88-204ENST00000572290 ZNF296Q8WUU4 475 aaPredicted RBP24.45■■□□□ 1.5
NUP88-204ENST00000572290 EDC3Q96F86 508 aaKnown RBP24.45■■□□□ 1.5
NUP88-204ENST00000572290 HAUS7Q99871 368 aa24.45■■□□□ 1.5
NUP88-204ENST00000572290 DHX36Q9H2U1 1008 aaKnown RBP24.45■■□□□ 1.5
NUP88-204ENST00000572290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.45■■□□□ 1.5
NUP88-204ENST00000572290 PDE6AP16499 860 aa24.44■■□□□ 1.5
NUP88-204ENST00000572290 DGKZQ13574 1117 aa24.44■■□□□ 1.5
NUP88-204ENST00000572290 PICK1Q9NRD5 415 aa24.44■■□□□ 1.5
NUP88-204ENST00000572290 ECHDC1Q9NTX5 307 aa24.44■■□□□ 1.5
NUP88-204ENST00000572290 FAM196BA6NMK8 535 aa24.43■■□□□ 1.5
NUP88-204ENST00000572290 CTNND1O60716 968 aaKnown RBP24.43■■□□□ 1.5
NUP88-204ENST00000572290 CAPN15O75808 1086 aa24.43■■□□□ 1.5
NUP88-204ENST00000572290 MCOLN1Q9GZU1 580 aa24.43■■□□□ 1.5
NUP88-204ENST00000572290 PI4KBQ9UBF8 816 aa24.43■■□□□ 1.5
NUP88-204ENST00000572290 USP5P45974 858 aa24.42■■□□□ 1.5
NUP88-204ENST00000572290 GPATCH3Q96I76 525 aa24.42■■□□□ 1.5
NUP88-204ENST00000572290 HERC5Q9UII4 1024 aaKnown RBP24.42■■□□□ 1.5
NUP88-204ENST00000572290 KCNH4Q9UQ05 1017 aa24.42■■□□□ 1.5
NUP88-204ENST00000572290 ZNF532Q9HCE3 1301 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 FKTNO75072 461 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 PTPRAP18433 802 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 CRHR2Q13324 411 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 CTU1Q7Z7A3 348 aaKnown RBP24.41■■□□□ 1.5
NUP88-204ENST00000572290 FAM43AQ8N2R8 423 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 ABHD8Q96I13 439 aa24.41■■□□□ 1.5
NUP88-204ENST00000572290 RIOK1Q9BRS2 568 aaKnown RBP24.41■■□□□ 1.5
NUP88-204ENST00000572290 MAGEB6P1A0A0J9YX57 407 aa24.4■■□□□ 1.5
NUP88-204ENST00000572290 AAMPQ13685 434 aa24.4■■□□□ 1.5
NUP88-204ENST00000572290 SAP30BPQ9UHR5 308 aaKnown RBP24.4■■□□□ 1.5
NUP88-204ENST00000572290 PALD1Q9ULE6 856 aa24.4■■□□□ 1.5
NUP88-204ENST00000572290 ZHX2Q9Y6X8 837 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms